diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/py-pymol/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/py-pymol/package.py | 74 |
1 files changed, 36 insertions, 38 deletions
diff --git a/var/spack/repos/builtin/packages/py-pymol/package.py b/var/spack/repos/builtin/packages/py-pymol/package.py index f346541c28..eaa50d97ee 100644 --- a/var/spack/repos/builtin/packages/py-pymol/package.py +++ b/var/spack/repos/builtin/packages/py-pymol/package.py @@ -8,57 +8,55 @@ from spack.package import * class PyPymol(PythonPackage): """PyMOL is a Python-enhanced molecular graphics tool. It excels at 3D - visualization of proteins, small molecules, density, surfaces, and - trajectories. It also includes molecular editing, ray tracing, and - movies. Open Source PyMOL is free to everyone!""" + visualization of proteins, small molecules, density, surfaces, and + trajectories. It also includes molecular editing, ray tracing, and + movies. Open Source PyMOL is free to everyone!""" homepage = "https://pymol.org" - url = "https://github.com/schrodinger/pymol-open-source/archive/v2.4.0.tar.gz" - - version('2.5.0', sha256='aa828bf5719bd9a14510118a93182a6e0cadc03a574ba1e327e1e9780a0e80b3') - version('2.4.0', sha256='5ede4ce2e8f53713c5ee64f5905b2d29bf01e4391da7e536ce8909d6b9116581') - version('2.3.0', sha256='62aa21fafd1db805c876f89466e47513809f8198395e1f00a5f5cc40d6f40ed0') - - depends_on('python+tkinter@2.7:', type=('build', 'link', 'run'), when='@2.3.0:2.4.0') - depends_on('python+tkinter@3.6:', type=('build', 'link', 'run'), when='@2.5.0:') - depends_on('gl') - depends_on('glew') - depends_on('libpng') - depends_on('freetype') - depends_on('glm') - depends_on('libmmtf-cpp') - depends_on('msgpack-c@2.1.5:') - depends_on('netcdf-cxx4') - depends_on('libxml2') - depends_on('py-pmw-patched', type=('build', 'run')) - depends_on('py-pyqt5', type=('build', 'run')) - depends_on('py-pmw', type=('build', 'run')) - depends_on('libmmtf-cpp', type=('build', 'run', 'link')) - depends_on('msgpack-c', type=('build', 'run')) - depends_on('libpng', type=('build', 'run')) - depends_on('py-numpy', type=('build', 'link', 'run')) - depends_on('py-msgpack', type=('build', 'run')) + url = "https://github.com/schrodinger/pymol-open-source/archive/v2.4.0.tar.gz" + + version("2.5.0", sha256="aa828bf5719bd9a14510118a93182a6e0cadc03a574ba1e327e1e9780a0e80b3") + version("2.4.0", sha256="5ede4ce2e8f53713c5ee64f5905b2d29bf01e4391da7e536ce8909d6b9116581") + version("2.3.0", sha256="62aa21fafd1db805c876f89466e47513809f8198395e1f00a5f5cc40d6f40ed0") + + depends_on("python+tkinter@2.7:", type=("build", "link", "run"), when="@2.3.0:2.4.0") + depends_on("python+tkinter@3.6:", type=("build", "link", "run"), when="@2.5.0:") + depends_on("gl") + depends_on("glew") + depends_on("libpng") + depends_on("freetype") + depends_on("glm") + depends_on("libmmtf-cpp") + depends_on("msgpack-c@2.1.5:") + depends_on("netcdf-cxx4") + depends_on("libxml2") + depends_on("py-pmw-patched", type=("build", "run")) + depends_on("py-pyqt5", type=("build", "run")) + depends_on("py-pmw", type=("build", "run")) + depends_on("libmmtf-cpp", type=("build", "run", "link")) + depends_on("msgpack-c", type=("build", "run")) + depends_on("libpng", type=("build", "run")) + depends_on("py-numpy", type=("build", "link", "run")) + depends_on("py-msgpack", type=("build", "run")) def install_options(self, spec, prefix): - return ['--no-launcher'] + return ["--no-launcher"] def install(self, spec, prefix): # Note: pymol monkeypatches distutils which breaks pip install, use deprecated # `python setup.py install` and distutils instead of `pip install` and # setuptools. See: https://github.com/schrodinger/pymol-open-source/issues/217 - python('setup.py', 'install', '--prefix=' + prefix, - *self.install_options(spec, prefix)) + python("setup.py", "install", "--prefix=" + prefix, *self.install_options(spec, prefix)) - @run_after('install') + @run_after("install") def install_launcher(self): binpath = self.prefix.bin mkdirp(self.prefix.bin) - fname = join_path(binpath, 'pymol') - script = join_path(python_platlib, 'pymol', '__init__.py') + fname = join_path(binpath, "pymol") + script = join_path(python_platlib, "pymol", "__init__.py") - shebang = '#!/bin/sh\n' - fdata = 'exec {0} {1} \"$@\"'.format(self.spec['python'].command, - script) - with open(fname, 'w') as new: + shebang = "#!/bin/sh\n" + fdata = 'exec {0} {1} "$@"'.format(self.spec["python"].command, script) + with open(fname, "w") as new: new.write(shebang + fdata) set_executable(fname) |