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Diffstat (limited to 'var/spack/repos/builtin/packages/py-quast/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/py-quast/package.py | 30 |
1 files changed, 30 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/py-quast/package.py b/var/spack/repos/builtin/packages/py-quast/package.py new file mode 100644 index 0000000000..41e966b24b --- /dev/null +++ b/var/spack/repos/builtin/packages/py-quast/package.py @@ -0,0 +1,30 @@ +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class PyQuast(PythonPackage): + """Quality Assessment Tool for Genome Assemblies""" + + homepage = "http://cab.spbu.ru/software/quast" + url = "https://github.com/ablab/quast/archive/quast_4.6.1.tar.gz" + + version('4.6.3', '16d77acb2e0f6436b58d9df7b732fb76') + version('4.6.1', '37ccd34e0040c17aa6f990353a92475c') + version('4.6.0', 'c04d62c50ec4d9caa9d7388950b8d144') + + depends_on('boost@1.56.0') + depends_on('perl@5.6.0:') + depends_on('python@2.5:,3.3:') + depends_on('py-setuptools', type='build') + depends_on('py-matplotlib', type=('build', 'run')) + depends_on('java', type=('build', 'run')) + depends_on('perl-time-hires', type=('build', 'run')) + depends_on('gnuplot', type=('build', 'run')) + depends_on('mummer', type=('build', 'run')) + depends_on('bedtools2', type=('build', 'run')) + depends_on('bwa', type=('build', 'run')) + depends_on('glimmer', type=('build', 'run')) |