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Diffstat (limited to 'var/spack/repos/builtin/packages/py-rseqc/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/py-rseqc/package.py | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/py-rseqc/package.py b/var/spack/repos/builtin/packages/py-rseqc/package.py new file mode 100644 index 0000000000..15563be2a0 --- /dev/null +++ b/var/spack/repos/builtin/packages/py-rseqc/package.py @@ -0,0 +1,23 @@ +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class PyRseqc(PythonPackage): + """RSeQC package provides a number of useful modules that can + comprehensively evaluate high throughput sequence data especially RNA-seq + data.""" + + homepage = "http://rseqc.sourceforge.net" + url = "https://pypi.io/packages/source/R/RSeQC/RSeQC-2.6.4.tar.gz" + + version('2.6.4', '935779c452ffc84f3b8b9fb3d485c782') + + depends_on('py-setuptools', type='build') + depends_on('py-bx-python', type=('build', 'run')) + depends_on('py-numpy', type=('build', 'run')) + depends_on('py-pysam', type=('build', 'run')) + depends_on('r', type=('build', 'run')) |