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Diffstat (limited to 'var/spack/repos/builtin/packages/py-umi-tools/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/py-umi-tools/package.py | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/py-umi-tools/package.py b/var/spack/repos/builtin/packages/py-umi-tools/package.py new file mode 100644 index 0000000000..d837ba6be6 --- /dev/null +++ b/var/spack/repos/builtin/packages/py-umi-tools/package.py @@ -0,0 +1,26 @@ +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class PyUmiTools(PythonPackage): + """Tools for handling Unique Molecular Identifiers in NGS data sets""" + + homepage = "https://github.com/CGATOxford/UMI-tools" + url = "https://github.com/CGATOxford/UMI-tools/archive/0.5.3.tar.gz" + + version('0.5.3', '08bdebe30f84867d352ff5e1a2fe4d94') + + depends_on('python@2.7:') + depends_on('py-setuptools@1.1:', type='build') + depends_on('py-numpy@1.7:', type=('build', 'run')) + depends_on('py-pandas@0.12:', type=('build', 'run')) + depends_on('py-pysam@0.8.4:', type=('build', 'run')) + depends_on('py-future', type=('build', 'run')) + depends_on('py-six', type=('build', 'run')) + depends_on('py-regex', type=('build', 'run')) + depends_on('py-scipy', type=('build', 'run')) + depends_on('py-matplotlib', type=('build', 'run')) |