diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/r-affxparser/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-affxparser/package.py | 26 |
1 files changed, 16 insertions, 10 deletions
diff --git a/var/spack/repos/builtin/packages/r-affxparser/package.py b/var/spack/repos/builtin/packages/r-affxparser/package.py index c998207b74..d909ce1c7a 100644 --- a/var/spack/repos/builtin/packages/r-affxparser/package.py +++ b/var/spack/repos/builtin/packages/r-affxparser/package.py @@ -7,18 +7,24 @@ from spack import * class RAffxparser(RPackage): - """Package for parsing Affymetrix files (CDF, CEL, CHP, BPMAP, BAR). - It provides methods for fast and memory efficient parsing of - Affymetrix files using the Affymetrix' Fusion SDK. Both ASCII- - and binary-based files are supported. Currently, there are methods - for reading chip definition file (CDF) and a cell intensity file (CEL). - These files can be read either in full or in part. For example, - probe signals from a few probesets can be extracted very quickly - from a set of CEL files into a convenient list structure.""" + """Affymetrix File Parsing SDK. - homepage = "https://www.bioconductor.org/packages/affxparser/" + Package for parsing Affymetrix files (CDF, CEL, CHP, BPMAP, BAR). It + provides methods for fast and memory efficient parsing of Affymetrix + files using the Affymetrix' Fusion SDK. Both ASCII- and binary-based + files are supported. Currently, there are methods for reading chip + definition file (CDF) and a cell intensity file (CEL). These files can + be read either in full or in part. For example, probe signals from a few + probesets can be extracted very quickly from a set of CEL files into a + convenient list structure.""" + + homepage = "https://bioconductor.org/packages/affxparser" git = "https://git.bioconductor.org/packages/affxparser.git" + version('1.56.0', commit='20d27701ad2bdfacf34d857bb8ecb4f505b4d056') + version('1.54.0', commit='dce83d23599a964086a84ced4afd13fc43e7cd4f') + version('1.52.0', commit='8e0c4b89ee1cb4ff95f58a5dd947249dc718bc58') + version('1.50.0', commit='01ef641727eadc2cc17b5dbb0b1432364436e3d5') version('1.48.0', commit='2461ea88f310b59c4a9a997a4b3dadedbd65a4aa') - depends_on('r@3.4.0:3.4.9', when='@1.48.0') + depends_on('r@2.14.0:', type=('build', 'run')) |