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-rw-r--r--var/spack/repos/builtin/packages/r-affycompatible/package.py26
1 files changed, 16 insertions, 10 deletions
diff --git a/var/spack/repos/builtin/packages/r-affycompatible/package.py b/var/spack/repos/builtin/packages/r-affycompatible/package.py
index 163c3a5468..1c07feb5b7 100644
--- a/var/spack/repos/builtin/packages/r-affycompatible/package.py
+++ b/var/spack/repos/builtin/packages/r-affycompatible/package.py
@@ -7,19 +7,25 @@ from spack import *
class RAffycompatible(RPackage):
- """This package provides an interface to Affymetrix chip annotation
- and sample attribute files. The package allows an easy way for users
- to download and manage local data bases of Affynmetrix NetAffx
- annotation files. The package also provides access to GeneChip
- Operating System (GCOS) and GeneChip Command Console
- (AGCC)-compatible sample annotation files."""
+ """Affymetrix GeneChip software compatibility.
- homepage = "https://www.bioconductor.org/packages/AffyCompatible/"
+ This package provides an interface to Affymetrix chip annotation and
+ sample attribute files. The package allows an easy way for users to
+ download and manage local data bases of Affynmetrix NetAffx annotation
+ files. The package also provides access to GeneChip Operating System
+ (GCOS) and GeneChip Command Console (AGCC)-compatible sample annotation
+ files."""
+
+ homepage = "https://bioconductor.org/packages/AffyCompatible"
git = "https://git.bioconductor.org/packages/AffyCompatible.git"
+ version('1.44.0', commit='98a27fbe880551fd32a5febb6c7bde0807eac476')
+ version('1.42.0', commit='699303cc20f292591e2faa12e211c588efb9eaa8')
+ version('1.40.0', commit='44838bdb5e8c26afbd898c49ed327ddd1a1d0301')
+ version('1.38.0', commit='d47ee3a3a3d3bce11121e80fe02ee216b9199b12')
version('1.36.0', commit='dbbfd43a54ae1de6173336683a9461084ebf38c3')
- depends_on('r@3.4.0:3.4.9', when=('@1.36.0'))
- depends_on('r-xml', type=('build', 'run'))
- depends_on('r-rcurl', type=('build', 'run'))
+ depends_on('r@2.7.0:', type=('build', 'run'))
+ depends_on('r-xml@2.8-1:', type=('build', 'run'))
+ depends_on('r-rcurl@0.8-1:', type=('build', 'run'))
depends_on('r-biostrings', type=('build', 'run'))