diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/r-biomart/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-biomart/package.py | 12 |
1 files changed, 8 insertions, 4 deletions
diff --git a/var/spack/repos/builtin/packages/r-biomart/package.py b/var/spack/repos/builtin/packages/r-biomart/package.py index 6e24a66a41..d1c4387288 100644 --- a/var/spack/repos/builtin/packages/r-biomart/package.py +++ b/var/spack/repos/builtin/packages/r-biomart/package.py @@ -1,4 +1,4 @@ -# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other +# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other # Spack Project Developers. See the top-level COPYRIGHT file for details. # # SPDX-License-Identifier: (Apache-2.0 OR MIT) @@ -7,7 +7,7 @@ from spack import * class RBiomart(RPackage): - """Interface to BioMart databases (i.e. Ensembl). + """Interface to BioMart databases (i.e. Ensembl) In recent years a wealth of biological data has become available in public data repositories. Easy access to these valuable data resources @@ -25,6 +25,7 @@ class RBiomart(RPackage): homepage = "https://bioconductor.org/packages/biomaRt" git = "https://git.bioconductor.org/packages/biomaRt.git" + version('2.46.2', commit='90d6abfdfa04259006f7b47efb10271ada76aec1') version('2.40.5', commit='ed9ddafb0d620168ea8e3ab4884f3457b8525c68') version('2.38.0', commit='16b997aba19a90a1c5fa64c442b1e7fcff99a658') version('2.36.1', commit='5634e57e20199f9dc1f8b927eb3893143fc02f4f') @@ -32,9 +33,12 @@ class RBiomart(RPackage): version('2.32.1', commit='f84d74424fa599f6d08f8db4612ca09914a9087f') depends_on('r-xml', type=('build', 'run')) - depends_on('r-rcurl', type=('build', 'run')) depends_on('r-annotationdbi', type=('build', 'run')) - depends_on('r-progress', when='@2.34.2:', type=('build', 'run')) depends_on('r-stringr', when='@2.34.2:', type=('build', 'run')) depends_on('r-httr', when='@2.34.2:', type=('build', 'run')) + depends_on('r-openssl', when='@2.46.2:', type=('build', 'run')) + depends_on('r-biocfilecache', when='@2.46.2:', type=('build', 'run')) + depends_on('r-rappdirs', when='@2.46.2:', type=('build', 'run')) + depends_on('r-xml2', when='@2.46.2:', type=('build', 'run')) + depends_on('r-rcurl', when='@:2.40.5', type=('build', 'run')) |