diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/r-biomart/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-biomart/package.py | 39 |
1 files changed, 13 insertions, 26 deletions
diff --git a/var/spack/repos/builtin/packages/r-biomart/package.py b/var/spack/repos/builtin/packages/r-biomart/package.py index d9c15151bd..b74a6794ba 100644 --- a/var/spack/repos/builtin/packages/r-biomart/package.py +++ b/var/spack/repos/builtin/packages/r-biomart/package.py @@ -1,27 +1,8 @@ -############################################################################## -# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. # -# This file is part of Spack. -# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://github.com/spack/spack -# Please also see the NOTICE and LICENSE files for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU Lesser General Public License (as -# published by the Free Software Foundation) version 2.1, February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU Lesser General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public -# License along with this program; if not, write to the Free Software -# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + from spack import * @@ -40,11 +21,17 @@ class RBiomart(RPackage): online queries from gene annotation to database mining.""" homepage = "https://bioconductor.org/packages/biomaRt/" - url = "https://git.bioconductor.org/packages/biomaRt" + git = "https://git.bioconductor.org/packages/biomaRt.git" - version('2.32.1', git='https://git.bioconductor.org/packages/biomaRt', commit='f84d74424fa599f6d08f8db4612ca09914a9087f') + version('2.36.1', commit='5634e57e20199f9dc1f8b927eb3893143fc02f4f') + version('2.34.2', commit='a7030915fbc6120cc6812aefdedba423a207459b') + version('2.32.1', commit='f84d74424fa599f6d08f8db4612ca09914a9087f') depends_on('r-xml', type=('build', 'run')) depends_on('r-rcurl', type=('build', 'run')) depends_on('r-annotationdbi', type=('build', 'run')) - depends_on('r@3.4.0:3.4.9', when='@2.32.1') + depends_on('r-progress', type=('build', 'run'), when='@2.34.2:') + depends_on('r-stringr', type=('build', 'run'), when='@2.34.2:') + depends_on('r-httr', type=('build', 'run'), when='@2.34.2:') + depends_on('r@3.4.0:3.4.9', when='@2.32.1:2.35.9', type=('build', 'run')) + depends_on('r@3.5.0:3.5.9', when='@2.36.1', type=('build', 'run')) |