diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/r-biostrings/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-biostrings/package.py | 40 |
1 files changed, 13 insertions, 27 deletions
diff --git a/var/spack/repos/builtin/packages/r-biostrings/package.py b/var/spack/repos/builtin/packages/r-biostrings/package.py index fee137c11b..b6337f29b8 100644 --- a/var/spack/repos/builtin/packages/r-biostrings/package.py +++ b/var/spack/repos/builtin/packages/r-biostrings/package.py @@ -1,27 +1,8 @@ -############################################################################## -# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. # -# This file is part of Spack. -# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://github.com/spack/spack -# Please also see the NOTICE and LICENSE files for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU Lesser General Public License (as -# published by the Free Software Foundation) version 2.1, February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU Lesser General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public -# License along with this program; if not, write to the Free Software -# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + from spack import * @@ -31,13 +12,18 @@ class RBiostrings(RPackage): or sets of sequences.""" homepage = "https://bioconductor.org/packages/Biostrings/" - url = "https://git.bioconductor.org/packages/Biostrings" - list_url = homepage + git = "https://git.bioconductor.org/packages/Biostrings.git" - version('2.44.2', git='https://git.bioconductor.org/packages/Biostrings', commit='e4a2b320fb21c5cab3ece7b3c6fecaedfb1e5200') + version('2.48.0', commit='aa3599a7d259d658014d087b86d71ab1deb5f12b') + version('2.44.2', commit='e4a2b320fb21c5cab3ece7b3c6fecaedfb1e5200') depends_on('r-biocgenerics', type=('build', 'run')) + depends_on('r-biocgenerics@0.15.6:', when='@2.48.0', type=('build', 'run')) depends_on('r-s4vectors', type=('build', 'run')) + depends_on('r-s4vectors@0.17.25:', when='@2.48.0', type=('build', 'run')) depends_on('r-iranges', type=('build', 'run')) + depends_on('r-iranges@2.13.24:', when='@2.48.0', type=('build', 'run')) depends_on('r-xvector', type=('build', 'run')) - depends_on('r@3.4.0:3.4.9', when='@2.44.2') + depends_on('r-xvector@0.19.8:', when='@2.48.0', type=('build', 'run')) + depends_on('r@3.4.0:3.4.9', when='@2.44.2', type=('build', 'run')) + depends_on('r@3.5.0:3.5.9', when='@2.48.0', type=('build', 'run')) |