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Diffstat (limited to 'var/spack/repos/builtin/packages/r-clusterprofiler/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-clusterprofiler/package.py | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-clusterprofiler/package.py b/var/spack/repos/builtin/packages/r-clusterprofiler/package.py new file mode 100644 index 0000000000..5a1f51dc95 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-clusterprofiler/package.py @@ -0,0 +1,28 @@ +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class RClusterprofiler(RPackage): + """This package implements methods to analyze and visualize functional + profiles (GO and KEGG) of gene and gene clusters.""" + + homepage = "https://www.bioconductor.org/packages/clusterProfiler/" + git = "https://git.bioconductor.org/packages/clusterProfiler.git" + + version('3.4.4', commit='b86b00e8405fe130e439362651a5567736e2d9d7') + + depends_on('r@3.4.0:3.4.9', when='@3.4.4') + depends_on('r-tidyr', type=('build', 'run')) + depends_on('r-rvcheck', type=('build', 'run')) + depends_on('r-qvalue', type=('build', 'run')) + depends_on('r-plyr', type=('build', 'run')) + depends_on('r-magrittr', type=('build', 'run')) + depends_on('r-gosemsim', type=('build', 'run')) + depends_on('r-go-db', type=('build', 'run')) + depends_on('r-ggplot2', type=('build', 'run')) + depends_on('r-annotationdbi', type=('build', 'run')) + depends_on('r-dose', type=('build', 'run')) |