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Diffstat (limited to 'var/spack/repos/builtin/packages/r-cner/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-cner/package.py | 37 |
1 files changed, 37 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-cner/package.py b/var/spack/repos/builtin/packages/r-cner/package.py new file mode 100644 index 0000000000..8a96c0b086 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-cner/package.py @@ -0,0 +1,37 @@ +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class RCner(RPackage): + """"Large-scale identification and advanced visualization of sets of + conserved noncoding elements.""" + + homepage = "https://bioconductor.org/packages/CNEr/" + git = "https://git.bioconductor.org/packages/CNEr.git" + + version('1.14.0', commit='b8634d65c51728c815127e22b45eba7c9b9db897') + + depends_on('r-biostrings@2.33.4:', type=('build', 'run')) + depends_on('r-dbi@0.7:', type=('build', 'run')) + depends_on('r-rsqlite@0.11.4:', type=('build', 'run')) + depends_on('r-genomeinfodb@1.1.3:', type=('build', 'run')) + depends_on('r-genomicranges@1.23.16:', type=('build', 'run')) + depends_on('r-rtracklayer@1.25.5:', type=('build', 'run')) + depends_on('r-xvector@0.5.4:', type=('build', 'run')) + depends_on('r-genomicalignments@1.1.9:', type=('build', 'run')) + depends_on('r-s4vectors@0.13.13:', type=('build', 'run')) + depends_on('r-iranges@2.5.27:', type=('build', 'run')) + depends_on('r-readr@0.2.2:', type=('build', 'run')) + depends_on('r-biocgenerics', type=('build', 'run')) + depends_on('r-reshape2@1.4.1:', type=('build', 'run')) + depends_on('r-ggplot2@2.1.0:', type=('build', 'run')) + depends_on('r-powerlaw@0.60.3:', type=('build', 'run')) + depends_on('r-annotate@1.50.0:', type=('build', 'run')) + depends_on('r-go-db@3.3.0:', type=('build', 'run')) + depends_on('r-keggrest@1.14.0:', type=('build', 'run')) + depends_on('r-utils@2.3.0:', type=('build', 'run')) + depends_on('r@3.4.3:3.4.9', when='@1.14.0') |