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Diffstat (limited to 'var/spack/repos/builtin/packages/r-delayedmatrixstats/package.py')
-rw-r--r-- | var/spack/repos/builtin/packages/r-delayedmatrixstats/package.py | 41 |
1 files changed, 41 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-delayedmatrixstats/package.py b/var/spack/repos/builtin/packages/r-delayedmatrixstats/package.py new file mode 100644 index 0000000000..47253903ce --- /dev/null +++ b/var/spack/repos/builtin/packages/r-delayedmatrixstats/package.py @@ -0,0 +1,41 @@ +# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class RDelayedmatrixstats(RPackage): + """Functions that Apply to Rows and Columns of 'DelayedMatrix' Objects. + + A port of the 'matrixStats' API for use with DelayedMatrix objects from + the 'DelayedArray' package. High-performing functions operating on rows + and columns of DelayedMatrix objects, e.g. col / rowMedians(), col / + rowRanks(), and col / rowSds(). Functions optimized per data type and + for subsetted calculations such that both memory usage and processing + time is minimized.""" + + homepage = "https://bioconductor.org/packages/DelayedMatrixStats" + git = "https://git.bioconductor.org/packages/DelayedMatrixStats.git" + + version('1.6.1', commit='4378d1898a403305a94b122c4f36d1215fa7708d') + version('1.4.0', commit='eb5b390ef99651fe87a346848f807de95afe8971') + version('1.2.0', commit='de868e730be6280dfad41a280ab09f4d3083c9ac') + version('1.0.3', commit='e29a3444980ff727c5b12286884b06dfaebf5b5b') + + depends_on('r-delayedarray', type=('build', 'run')) + depends_on('r-matrixstats@0.53.1:', type=('build', 'run')) + depends_on('r-matrix', type=('build', 'run')) + depends_on('r-s4vectors', type=('build', 'run')) + depends_on('r-iranges', type=('build', 'run')) + + depends_on('r-delayedarray@0.5.27:', when='@1.2.0:', type=('build', 'run')) + depends_on('r-s4vectors@0.17.5:', when='@1.2.0:', type=('build', 'run')) + + depends_on('r-delayedarray@0.7.37:', when='@1.4.0:', type=('build', 'run')) + depends_on('r-hdf5array@1.7.10:', when='@1.4.0:', type=('build', 'run')) + depends_on('r-biocparallel', when='@1.4.0:', type=('build', 'run')) + + depends_on('r-delayedarray@0.9.8:', when='@1.6.1:', type=('build', 'run')) + depends_on('r-matrixstats@0.55.0:', when='@1.6.1:', type=('build', 'run')) |