diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/r-deseq2/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-deseq2/package.py | 36 |
1 files changed, 10 insertions, 26 deletions
diff --git a/var/spack/repos/builtin/packages/r-deseq2/package.py b/var/spack/repos/builtin/packages/r-deseq2/package.py index 96a2426c4f..2a470b808d 100644 --- a/var/spack/repos/builtin/packages/r-deseq2/package.py +++ b/var/spack/repos/builtin/packages/r-deseq2/package.py @@ -1,27 +1,8 @@ -############################################################################## -# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. # -# This file is part of Spack. -# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://github.com/spack/spack -# Please also see the NOTICE and LICENSE files for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU Lesser General Public License (as -# published by the Free Software Foundation) version 2.1, February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU Lesser General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public -# License along with this program; if not, write to the Free Software -# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + from spack import * @@ -32,11 +13,12 @@ class RDeseq2(RPackage): distribution.""" homepage = "https://www.bioconductor.org/packages/DESeq2/" - url = "https://git.bioconductor.org/packages/DESeq2" + git = "https://git.bioconductor.org/packages/DESeq2.git" - version('1.16.1', git='https://git.bioconductor.org/packages/DESeq2', commit='0a815574382704a08ef8b906eceb0296f81cded5') + version('1.20.0', commit='7e88ea5c5e68473824ce0af6e10f19e22374cb7c') + version('1.18.1', commit='ef65091d46436af68915124b752f5e1cc55e93a7') + version('1.16.1', commit='0a815574382704a08ef8b906eceb0296f81cded5') - depends_on('r@3.4.0:3.4.9', when='@1.16.1') depends_on("r-rcpparmadillo", type=('build', 'run')) depends_on('r-s4vectors', type=('build', 'run')) depends_on('r-iranges', type=('build', 'run')) @@ -51,3 +33,5 @@ class RDeseq2(RPackage): depends_on('r-ggplot2', type=('build', 'run')) depends_on('r-hmisc', type=('build', 'run')) depends_on('r-rcpp', type=('build', 'run')) + depends_on('r@3.4.0:3.4.9', when='@1.16.1:1.19', type=('build', 'run')) + depends_on('r@3.5.0:3.5.9', when='@1.20.0', type=('build', 'run')) |