diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/r-gdsfmt/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-gdsfmt/package.py | 34 |
1 files changed, 20 insertions, 14 deletions
diff --git a/var/spack/repos/builtin/packages/r-gdsfmt/package.py b/var/spack/repos/builtin/packages/r-gdsfmt/package.py index 960f98f1f4..b388b0d373 100644 --- a/var/spack/repos/builtin/packages/r-gdsfmt/package.py +++ b/var/spack/repos/builtin/packages/r-gdsfmt/package.py @@ -7,22 +7,28 @@ from spack import * class RGdsfmt(RPackage): - """This package provides a high-level R interface to CoreArray Genomic - Data Structure (GDS) data files, which are portable across platforms - with hierarchical structure to store multiple scalable array-oriented - data sets with metadata information. It is suited for large-scale - datasets, especially for data which are much larger than the available - random-access memory. The gdsfmt package offers the efficient - operations specifically designed for integers of less than 8 bits, - since a diploid genotype, like single-nucleotide polymorphism (SNP), - usually occupies fewer bits than a byte. Data compression and - decompression are available with relatively efficient random access. - It is also allowed to read a GDS file in parallel with multiple R - processes supported by the package parallel.""" + """R Interface to CoreArray Genomic Data Structure (GDS) Files. - homepage = "http://bioconductor.org/packages/gdsfmt/" + This package provides a high-level R interface to CoreArray Genomic Data + Structure (GDS) data files, which are portable across platforms with + hierarchical structure to store multiple scalable array-oriented data + sets with metadata information. It is suited for large-scale datasets, + especially for data which are much larger than the available random- + access memory. The gdsfmt package offers the efficient operations + specifically designed for integers of less than 8 bits, since a diploid + genotype, like single-nucleotide polymorphism (SNP), usually occupies + fewer bits than a byte. Data compression and decompression are available + with relatively efficient random access. It is also allowed to read a + GDS file in parallel with multiple R processes supported by the package + parallel.""" + + homepage = "https://bioconductor.org/packages/gdsfmt" git = "https://git.bioconductor.org/packages/gdsfmt.git" + version('1.20.0', commit='b1fbaba0a5ace3dc45daecc85168651cd85dce00') + version('1.18.1', commit='b911b953e9db7988e93ec2010b0ab1e384d073c9') + version('1.16.0', commit='49b011452585e432b983b68466a230c9b71d8a95') version('1.14.1', commit='15743647b7eea5b82d3284858b4591fb6e59959d') + version('1.12.0', commit='d705a95b0bea7be2a2b37e939f45017337ba0fb6') - depends_on('r@3.4.0:3.4.9', when='@1.14.1') + depends_on('r@2.15.0:', type=('build', 'run')) |