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-rw-r--r--var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py34
1 files changed, 9 insertions, 25 deletions
diff --git a/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py b/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py
index 8e231ac43c..cf74104950 100644
--- a/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py
+++ b/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py
@@ -1,27 +1,8 @@
-##############################################################################
-# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
-# Produced at the Lawrence Livermore National Laboratory.
+# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
-# This file is part of Spack.
-# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
-# LLNL-CODE-647188
-#
-# For details, see https://github.com/spack/spack
-# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
-#
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU Lesser General Public License (as
-# published by the Free Software Foundation) version 2.1, February 1999.
-#
-# This program is distributed in the hope that it will be useful, but
-# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
-# conditions of the GNU Lesser General Public License for more details.
-#
-# You should have received a copy of the GNU Lesser General Public
-# License along with this program; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
-##############################################################################
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
from spack import *
@@ -29,8 +10,11 @@ class RGenomeinfodbdata(RPackage):
"""for mapping between NCBI taxonomy ID and species. Used by functions
in the GenomeInfoDb package."""
- homepage = "http://www.example.co://bioconductor.org/packages/3.5/data/annotation/html/GenomeInfoDbData.html"
+ homepage = "https://bioconductor.org/packages/GenomeInfoDbData/"
url = "https://bioconductor.org/packages/3.5/data/annotation/src/contrib/GenomeInfoDbData_0.99.0.tar.gz"
+ version('1.1.0', '6efdca22839c90d455843bdab7c0ecb5d48e3b6c2f7b4882d3210a6bbad4304c',
+ url='https://bioconductor.org/packages/release/data/annotation/src/contrib/GenomeInfoDbData_1.1.0.tar.gz')
version('0.99.0', '85977b51061dd02a90153db887040d05')
- depends_on('r@3.4.0:3.4.9', when='@0.99.0')
+ depends_on('r@3.4.0:3.4.9', when='@0.99.0', type=('build', 'run'))
+ depends_on('r@3.5.0:3.5.9', when='@1.1.0', type=('build', 'run'))