diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/r-genomicranges/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-genomicranges/package.py | 52 |
1 files changed, 21 insertions, 31 deletions
diff --git a/var/spack/repos/builtin/packages/r-genomicranges/package.py b/var/spack/repos/builtin/packages/r-genomicranges/package.py index bd3f685acd..d362b57909 100644 --- a/var/spack/repos/builtin/packages/r-genomicranges/package.py +++ b/var/spack/repos/builtin/packages/r-genomicranges/package.py @@ -1,27 +1,8 @@ -############################################################################## -# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. # -# This file is part of Spack. -# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://github.com/spack/spack -# Please also see the NOTICE and LICENSE files for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU Lesser General Public License (as -# published by the Free Software Foundation) version 2.1, February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU Lesser General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public -# License along with this program; if not, write to the Free Software -# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + from spack import * @@ -38,14 +19,23 @@ class RGenomicranges(RPackage): infrastructure.""" homepage = "https://bioconductor.org/packages/GenomicRanges/" - url = "https://git.bioconductor.org/packages/GenomicRanges" - list_url = homepage + git = "https://git.bioconductor.org/packages/GenomicRanges.git" - version('1.28.6', git='https://git.bioconductor.org/packages/GenomicRanges', commit='197472d618f3ed04c795dc6ed435500c29619563') + version('1.32.6', commit='31426be0fd6b76f7858971dc45aaf6e6d1dbac4e') + version('1.30.3', commit='e99979054bc50ed8c0109bc54563036c1b368997') + version('1.28.6', commit='197472d618f3ed04c795dc6ed435500c29619563') - depends_on('r-biocgenerics', type=('build', 'run')) - depends_on('r-s4vectors', type=('build', 'run')) - depends_on('r-iranges', type=('build', 'run')) - depends_on('r-genomeinfodb', type=('build', 'run')) + depends_on('r-biocgenerics@0.21.2:', type=('build', 'run')) + depends_on('r-biocgenerics@0.25.3:', when='@1.32.6', type=('build', 'run')) + depends_on('r-s4vectors@0.9.47:', type=('build', 'run')) + depends_on('r-s4vectors@0.17.32:', when='@1.32.6', type=('build', 'run')) + depends_on('r-iranges@2.9.11:', when='@1.28.6', type=('build', 'run')) + depends_on('r-iranges@2.11.16:', when='@1.30.3', type=('build', 'run')) + depends_on('r-iranges@2.14.4:', when='@1.32.6', type=('build', 'run')) + depends_on('r-genomeinfodb@1.11.5:', when='@1.28.6', type=('build', 'run')) + depends_on('r-genomeinfodb@1.13.1:', when='@1.30.3', type=('build', 'run')) + depends_on('r-genomeinfodb@1.15.2:', when='@1.32.6', type=('build', 'run')) depends_on('r-xvector', type=('build', 'run')) - depends_on('r@3.4.0:3.4.9', when='@1.28.6') + depends_on('r-xvector@0.19.8:', when='@1.32.6', type=('build', 'run')) + depends_on('r@3.4.0:3.4.9', when='@1.28.6', type=('build', 'run')) + depends_on('r@3.5.0:3.5.9', when='@1.32.6', type=('build', 'run')) |