diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/r-glimma/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-glimma/package.py | 26 |
1 files changed, 18 insertions, 8 deletions
diff --git a/var/spack/repos/builtin/packages/r-glimma/package.py b/var/spack/repos/builtin/packages/r-glimma/package.py index 3e943d719c..e2a2aec250 100644 --- a/var/spack/repos/builtin/packages/r-glimma/package.py +++ b/var/spack/repos/builtin/packages/r-glimma/package.py @@ -7,18 +7,28 @@ from spack import * class RGlimma(RPackage): - """This package generates interactive visualisations for analysis of - RNA-sequencing data using output from limma, edgeR or DESeq2 packages - in an HTML page. The interactions are built on top of the popular - static representations of analysis results in order to provide - additional information.""" + """Interactive HTML graphics. - homepage = "https://bioconductor.org/packages/release/bioc/html/Glimma.html" + This package generates interactive visualisations for analysis of RNA- + sequencing data using output from limma, edgeR or DESeq2 packages in an + HTML page. The interactions are built on top of the popular static + representations of analysis results in order to provide additional + information.""" + + homepage = "https://bioconductor.org/packages/Glimma" git = "https://git.bioconductor.org/packages/Glimma.git" - version('1.8.2', commit='f4aa1f05c2890d04b01ad4c0ab27f2f729f2c969') + version('1.12.0', commit='d02174239fe0b47983d6947ed42a1a53b24caecb') + version('1.10.1', commit='ffc7abc36190396598fadec5e9c653441e47be72') + version('1.8.2', commit='7696aca2c023f74d244b6c908a6e7ba52bfcb34b') + version('1.6.0', commit='57572996982806aa7ac155eedb97b03249979610') + version('1.4.0', commit='c613c5334ed7868f36d5716b97fdb6234fb291f8') - depends_on('r@3.5.0:3.5.9', when='@1.8.2:', type=('build', 'run')) + depends_on('r@3.3.0:', type=('build', 'run')) + depends_on('r-biobase', when='@1.4.0:1.6.0', type=('build', 'run')) depends_on('r-edger', type=('build', 'run')) depends_on('r-jsonlite', type=('build', 'run')) + depends_on('r-scater', when='@1.4.0', type=('build', 'run')) depends_on('r-s4vectors', type=('build', 'run')) + + depends_on('r@3.4.0:', when='@1.6.0:', type=('build', 'run')) |