diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/r-gosemsim/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-gosemsim/package.py | 28 |
1 files changed, 18 insertions, 10 deletions
diff --git a/var/spack/repos/builtin/packages/r-gosemsim/package.py b/var/spack/repos/builtin/packages/r-gosemsim/package.py index 0077bb011e..58b10a5239 100644 --- a/var/spack/repos/builtin/packages/r-gosemsim/package.py +++ b/var/spack/repos/builtin/packages/r-gosemsim/package.py @@ -7,20 +7,28 @@ from spack import * class RGosemsim(RPackage): - """The semantic comparisons of Gene Ontology (GO) annotations provide - quantitative ways to compute similarities between genes and gene - groups, and have became important basis for many bioinformatics - analysis approaches. GOSemSim is an R package for semantic similarity - computation among GO terms, sets of GO terms, gene products and gene - clusters. GOSemSim implemented five methods proposed by Resnik, - Schlicker, Jiang, Lin and Wang respectively.""" - - homepage = "https://www.bioconductor.org/packages/GOSemSim/" + """GO-terms Semantic Similarity Measures. + + The semantic comparisons of Gene Ontology (GO) annotations provide + quantitative ways to compute similarities between genes and gene groups, + and have became important basis for many bioinformatics analysis + approaches. GOSemSim is an R package for semantic similarity computation + among GO terms, sets of GO terms, gene products and gene clusters. + GOSemSim implemented five methods proposed by Resnik, Schlicker, Jiang, + Lin and Wang respectively.""" + + homepage = "https://bioconductor.org/packages/GOSemSim" git = "https://git.bioconductor.org/packages/GOSemSim.git" + version('2.10.0', commit='5db1ecbf2f8d870430d6e587609327d05ba3ad7b') + version('2.8.0', commit='c8c985b2a814cc2365c7f05b2509205e1b6b7f58') + version('2.6.2', commit='2ffe78e89276e804306554965fc0799318ec56ed') + version('2.4.1', commit='0656e845860d14e054670ffc246a1c53f699299c') version('2.2.0', commit='247434790e6c8cf99e5643f569390362b8c87c52') - depends_on('r@3.4.0:3.4.9', when='@2.2.0') + depends_on('r@3.3.2:', type=('build', 'run')) depends_on('r-annotationdbi', type=('build', 'run')) depends_on('r-go-db', type=('build', 'run')) depends_on('r-rcpp', type=('build', 'run')) + + depends_on('r@3.4.0:', when='@2.8.0:', type=('build', 'run')) |