diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/r-mergemaid/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-mergemaid/package.py | 30 |
1 files changed, 18 insertions, 12 deletions
diff --git a/var/spack/repos/builtin/packages/r-mergemaid/package.py b/var/spack/repos/builtin/packages/r-mergemaid/package.py index f85fa253fe..6f77ce328e 100644 --- a/var/spack/repos/builtin/packages/r-mergemaid/package.py +++ b/var/spack/repos/builtin/packages/r-mergemaid/package.py @@ -7,23 +7,29 @@ from spack import * class RMergemaid(RPackage): - """The functions in this R extension are intended for cross-study - comparison of gene expression array data. Required from the user is - gene expression matrices, their corresponding gene-id vectors and - other useful information, and they could be 'list','matrix', or - 'ExpressionSet'. The main function is 'mergeExprs' which transforms - the input objects into data in the merged format, such that common - genes in different datasets can be easily found. And the function - 'intcor' calculate the correlation coefficients. Other functions use - the output from 'modelOutcome' to graphically display the results and - cross-validate associations of gene expression data with survival.""" + """Merge Maid. - homepage = "https://www.bioconductor.org/packages/MergeMaid/" + The functions in this R extension are intended for cross-study + comparison of gene expression array data. Required from the user is gene + expression matrices, their corresponding gene-id vectors and other + useful information, and they could be 'list','matrix', or + 'ExpressionSet'. The main function is 'mergeExprs' which transforms the + input objects into data in the merged format, such that common genes in + different datasets can be easily found. And the function 'intcor' + calculate the correlation coefficients. Other functions use the output + from 'modelOutcome' to graphically display the results and cross- + validate associations of gene expression data with survival.""" + + homepage = "https://bioconductor.org/packages/MergeMaid" git = "https://git.bioconductor.org/packages/MergeMaid.git" + version('2.56.0', commit='c510d1d85bb39476e8397b24c4bc127780a17686') + version('2.54.0', commit='8e79bd2bd06b25138b3c5107681c89d714a3b194') + version('2.52.0', commit='88a1ddfd9cdbe902ba40fae0f39ee5665ac33a74') + version('2.50.0', commit='b77d7fcb8ac8cf9ee71303bb193ef1a36a7f6049') version('2.48.0', commit='aee89c523fcafff4c166ff3db4fff90df16a1ed4') + depends_on('r@2.10.0:', type=('build', 'run')) depends_on('r-survival', type=('build', 'run')) depends_on('r-biobase', type=('build', 'run')) depends_on('r-mass', type=('build', 'run')) - depends_on('r@3.4.0:3.4.9', when='@2.48.0') |