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Diffstat (limited to 'var/spack/repos/builtin/packages/r-metapod/package.py')
-rw-r--r-- | var/spack/repos/builtin/packages/r-metapod/package.py | 24 |
1 files changed, 24 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-metapod/package.py b/var/spack/repos/builtin/packages/r-metapod/package.py new file mode 100644 index 0000000000..b3759f931b --- /dev/null +++ b/var/spack/repos/builtin/packages/r-metapod/package.py @@ -0,0 +1,24 @@ +# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class RMetapod(RPackage): + """Meta-Analyses on P-Values of Differential Analyses. + + Implements a variety of methods for combining p-values in differential + analyses of genome-scale datasets. Functions can combine p-values across + different tests in the same analysis (e.g., genomic windows in ChIP-seq, + exons in RNA-seq) or for corresponding tests across separate analyses + (e.g., replicated comparisons, effect of different treatment conditions). + Support is provided for handling log-transformed input p-values, missing + values and weighting where appropriate.""" + + bioc = "metapod" + + version("1.4.0", commit="e71c2072e5b39f74599e279b28f4da7923b515fb") + + depends_on("r-rcpp", type=("build", "run")) |