diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/r-mzr/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-mzr/package.py | 56 |
1 files changed, 28 insertions, 28 deletions
diff --git a/var/spack/repos/builtin/packages/r-mzr/package.py b/var/spack/repos/builtin/packages/r-mzr/package.py index 91c48b2a8f..3db1724496 100644 --- a/var/spack/repos/builtin/packages/r-mzr/package.py +++ b/var/spack/repos/builtin/packages/r-mzr/package.py @@ -8,35 +8,35 @@ from spack.package import * class RMzr(RPackage): """parser for netCDF, mzXML, mzData and mzML and mzIdentML files (mass - spectrometry data). + spectrometry data). - mzR provides a unified API to the common file formats and parsers - available for mass spectrometry data. It comes with a wrapper for the - ISB random access parser for mass spectrometry mzXML, mzData and mzML - files. The package contains the original code written by the ISB, and a - subset of the proteowizard library for mzML and mzIdentML. The netCDF - reading code has previously been used in XCMS.""" + mzR provides a unified API to the common file formats and parsers + available for mass spectrometry data. It comes with a wrapper for the + ISB random access parser for mass spectrometry mzXML, mzData and mzML + files. The package contains the original code written by the ISB, and a + subset of the proteowizard library for mzML and mzIdentML. The netCDF + reading code has previously been used in XCMS.""" bioc = "mzR" - version('2.30.0', commit='563ae755cfc7de1ac8862247779182b7b3aebdcc') - version('2.28.0', commit='bee7d6fb5f99e1fab5444ae1ad27b0bc6e83be9e') - version('2.24.1', commit='e1d4de8761e6729fd45320d842691c8fe9116b7b') - version('2.18.1', commit='13f9f9b1149859c3e29cfce941d958cc4f680546') - version('2.16.2', commit='22d7dad98f46b5bed7f6f7b3a703dcdf5997f709') - version('2.14.0', commit='bf1154bc45101d95b5a67c66980856a779b84bd4') - version('2.12.0', commit='f05eb27ae31c3d019cca10fc3b9ee513cbcdfc5a') - version('2.10.0', commit='a6168b68e48c281e88de9647254a8db1e21df388') - - depends_on('r@4.0.0:', type=('build', 'run'), when='@2.30.0:') - depends_on('r-rcpp@0.10.1:', type=('build', 'run')) - depends_on('r-biobase', type=('build', 'run')) - depends_on('r-biocgenerics@0.13.6:', type=('build', 'run')) - depends_on('r-protgenerics', type=('build', 'run')) - depends_on('r-protgenerics@1.9.1:', type=('build', 'run'), when='@2.12.0:') - depends_on('r-protgenerics@1.17.3:', type=('build', 'run'), when='@2.24.1:') - depends_on('r-ncdf4', type=('build', 'run'), when='@2.16.2:') - depends_on('r-rhdf5lib@1.1.4:', type=('build', 'run'), when='@2.14.0:') - depends_on('gmake', type='build') - - depends_on('r-zlibbioc', type=('build', 'run'), when='@:2.28.0') + version("2.30.0", commit="563ae755cfc7de1ac8862247779182b7b3aebdcc") + version("2.28.0", commit="bee7d6fb5f99e1fab5444ae1ad27b0bc6e83be9e") + version("2.24.1", commit="e1d4de8761e6729fd45320d842691c8fe9116b7b") + version("2.18.1", commit="13f9f9b1149859c3e29cfce941d958cc4f680546") + version("2.16.2", commit="22d7dad98f46b5bed7f6f7b3a703dcdf5997f709") + version("2.14.0", commit="bf1154bc45101d95b5a67c66980856a779b84bd4") + version("2.12.0", commit="f05eb27ae31c3d019cca10fc3b9ee513cbcdfc5a") + version("2.10.0", commit="a6168b68e48c281e88de9647254a8db1e21df388") + + depends_on("r@4.0.0:", type=("build", "run"), when="@2.30.0:") + depends_on("r-rcpp@0.10.1:", type=("build", "run")) + depends_on("r-biobase", type=("build", "run")) + depends_on("r-biocgenerics@0.13.6:", type=("build", "run")) + depends_on("r-protgenerics", type=("build", "run")) + depends_on("r-protgenerics@1.9.1:", type=("build", "run"), when="@2.12.0:") + depends_on("r-protgenerics@1.17.3:", type=("build", "run"), when="@2.24.1:") + depends_on("r-ncdf4", type=("build", "run"), when="@2.16.2:") + depends_on("r-rhdf5lib@1.1.4:", type=("build", "run"), when="@2.14.0:") + depends_on("gmake", type="build") + + depends_on("r-zlibbioc", type=("build", "run"), when="@:2.28.0") |