diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/r-pegas/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-pegas/package.py | 23 |
1 files changed, 11 insertions, 12 deletions
diff --git a/var/spack/repos/builtin/packages/r-pegas/package.py b/var/spack/repos/builtin/packages/r-pegas/package.py index a1390303a3..300d517161 100644 --- a/var/spack/repos/builtin/packages/r-pegas/package.py +++ b/var/spack/repos/builtin/packages/r-pegas/package.py @@ -7,24 +7,23 @@ from spack import * class RPegas(RPackage): - """Population and Evolutionary Genetics Analysis System + """Population and Evolutionary Genetics Analysis System. - Functions for reading, writing, plotting, analysing, and - manipulating allelic and haplotypic data, including from VCF files, - and for the analysis of population nucleotide sequences and - micro-satellites including coalescent analyses, linkage - disequilibrium, population structure (Fst, Amova) and equilibrium - (HWE), haplotype networks, minimum spanning tree and network, and - median-joining networks.""" + Functions for reading, writing, plotting, analysing, and manipulating + allelic and haplotypic data, including from VCF files, and for the analysis + of population nucleotide sequences and micro-satellites including + coalescent analyses, linkage disequilibrium, population structure (Fst, + Amova) and equilibrium (HWE), haplotype networks, minimum spanning tree and + network, and median-joining networks.""" - homepage = "http://ape-package.ird.fr/pegas.html" - url = "https://cloud.r-project.org/src/contrib/pegas_0.14.tar.gz" - list_url = "https://cloud.r-project.org/src/contrib/Archive/pegas" + cran = "pegas" maintainers = ['dorton21'] + version('1.1', sha256='87ba91a819496dfc3abdcc792ff853a6d49caae6335598a24c23e8851505ed59') version('0.14', sha256='7df90e6c4a69e8dbed2b3f68b18f1975182475bf6f86d4159256b52fd5332053') depends_on('r@3.2.0:', type=('build', 'run')) depends_on('r-ape@5.3-11:', type=('build', 'run')) - depends_on('r-adegenet', type=('build', 'run')) + + depends_on('r-adegenet', type=('build', 'run'), when='@:0.14') |