diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/r-phantompeakqualtools/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-phantompeakqualtools/package.py | 26 |
1 files changed, 13 insertions, 13 deletions
diff --git a/var/spack/repos/builtin/packages/r-phantompeakqualtools/package.py b/var/spack/repos/builtin/packages/r-phantompeakqualtools/package.py index 6d3003ef20..c62f1629a6 100644 --- a/var/spack/repos/builtin/packages/r-phantompeakqualtools/package.py +++ b/var/spack/repos/builtin/packages/r-phantompeakqualtools/package.py @@ -9,28 +9,28 @@ from spack.pkg.builtin.boost import Boost class RPhantompeakqualtools(RPackage): """Computes informative enrichment and quality measures for - ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. This is a modified version - of r-spp to be used in conjunction with the phantompeakqualtools - package.""" + ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. This is a modified version + of r-spp to be used in conjunction with the phantompeakqualtools + package.""" homepage = "https://github.com/kundajelab/phantompeakqualtools" - url = "https://github.com/kundajelab/phantompeakqualtools/raw/master/spp_1.14.tar.gz" + url = "https://github.com/kundajelab/phantompeakqualtools/raw/master/spp_1.14.tar.gz" - version('1.14', sha256='d03be6163e82aed72298e54a92c181570f9975a395f57a69b21ac02b1001520b') + version("1.14", sha256="d03be6163e82aed72298e54a92c181570f9975a395f57a69b21ac02b1001520b") - depends_on('boost@1.41.0:') + depends_on("boost@1.41.0:") # TODO: replace this with an explicit list of components of Boost, # for instance depends_on('boost +filesystem') # See https://github.com/spack/spack/pull/22303 for reference depends_on(Boost.with_default_variants) - depends_on('r-catools', type=('build', 'run')) - depends_on('r-snow', type=('build', 'run')) - depends_on('r-snowfall', type=('build', 'run')) - depends_on('r-bitops', type=('build', 'run')) - depends_on('r-rsamtools', type=('build', 'run')) + depends_on("r-catools", type=("build", "run")) + depends_on("r-snow", type=("build", "run")) + depends_on("r-snowfall", type=("build", "run")) + depends_on("r-bitops", type=("build", "run")) + depends_on("r-rsamtools", type=("build", "run")) - conflicts('%gcc@6:') + conflicts("%gcc@6:") def setup_build_environment(self, env): - env.set('BOOST_ROOT', self.spec['boost'].prefix) + env.set("BOOST_ROOT", self.spec["boost"].prefix) |