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Diffstat (limited to 'var/spack/repos/builtin/packages/r-phyloseq/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-phyloseq/package.py | 34 |
1 files changed, 34 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-phyloseq/package.py b/var/spack/repos/builtin/packages/r-phyloseq/package.py new file mode 100644 index 0000000000..c2323c4209 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-phyloseq/package.py @@ -0,0 +1,34 @@ +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class RPhyloseq(RPackage): + """phyloseq provides a set of classes and tools to facilitate the import, + storage, analysis, and graphical display of microbiome census data.""" + + homepage = "https://www.bioconductor.org/packages/phyloseq/" + git = "https://git.bioconductor.org/packages/phyloseq.git" + + version('1.20.0', commit='107d1d5e3437a6e33982c06a548d3cc91df2a7e0') + + depends_on('r@3.4.0:3.4.9', when='@1.20.0') + depends_on('r-biocgenerics', type=('build', 'run')) + depends_on('r-ade4', type=('build', 'run')) + depends_on('r-ape', type=('build', 'run')) + depends_on('r-biomformat', type=('build', 'run')) + depends_on('r-biostrings', type=('build', 'run')) + depends_on('r-cluster', type=('build', 'run')) + depends_on('r-data-table', type=('build', 'run')) + depends_on('r-foreach', type=('build', 'run')) + depends_on('r-ggplot2', type=('build', 'run')) + depends_on('r-igraph', type=('build', 'run')) + depends_on('r-multtest', type=('build', 'run')) + depends_on('r-plyr', type=('build', 'run')) + depends_on('r-reshape2', type=('build', 'run')) + depends_on('r-scales', type=('build', 'run')) + depends_on('r-vegan', type=('build', 'run')) + depends_on('r-biobase', type=('build', 'run')) |