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Diffstat (limited to 'var/spack/repos/builtin/packages/r-scuttle/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-scuttle/package.py | 32 |
1 files changed, 32 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-scuttle/package.py b/var/spack/repos/builtin/packages/r-scuttle/package.py new file mode 100644 index 0000000000..5646ad08f2 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-scuttle/package.py @@ -0,0 +1,32 @@ +# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class RScuttle(RPackage): + """Single-Cell RNA-Seq Analysis Utilities + + Provides basic utility functions for performing single-cell analyses, + focusing on simple normalization, quality control and data transformations. + Also provides some helper functions to assist development of other + packages.""" + + homepage = "https://bioconductor.org/packages/scuttle/" + git = "https://git.bioconductor.org/packages/scuttle" + + version('1.0.4', commit='a827e2759d80e6c3510e2f8fd4bd680274206d9f') + + depends_on('r-singlecellexperiment', type=('build', 'run')) + depends_on('r-matrix', type=('build', 'run')) + depends_on('r-rcpp', type=('build', 'run')) + depends_on('r-biocgenerics', type=('build', 'run')) + depends_on('r-s4vectors', type=('build', 'run')) + depends_on('r-biocparallel', type=('build', 'run')) + depends_on('r-genomicranges', type=('build', 'run')) + depends_on('r-summarizedexperiment', type=('build', 'run')) + depends_on('r-delayedarray', type=('build', 'run')) + depends_on('r-delayedmatrixstats', type=('build', 'run')) + depends_on('r-beachmat', type=('build', 'run')) |