diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/r-somaticsignatures/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-somaticsignatures/package.py | 18 |
1 files changed, 12 insertions, 6 deletions
diff --git a/var/spack/repos/builtin/packages/r-somaticsignatures/package.py b/var/spack/repos/builtin/packages/r-somaticsignatures/package.py index 7a1c8b2ca3..a907249f35 100644 --- a/var/spack/repos/builtin/packages/r-somaticsignatures/package.py +++ b/var/spack/repos/builtin/packages/r-somaticsignatures/package.py @@ -7,16 +7,23 @@ from spack import * class RSomaticsignatures(RPackage): - """The SomaticSignatures package identifies mutational signatures of - single nucleotide variants (SNVs). It provides a infrastructure related - to the methodology described in Nik-Zainal (2012, Cell), with - flexibility in the matrix decomposition algorithms.""" + """Somatic Signatures. - homepage = "https://bioconductor.org/packages/SomaticSignatures/" + The SomaticSignatures package identifies mutational signatures of single + nucleotide variants (SNVs). It provides a infrastructure related to the + methodology described in Nik-Zainal (2012, Cell), with flexibility in + the matrix decomposition algorithms.""" + + homepage = "https://bioconductor.org/packages/SomaticSignatures" git = "https://git.bioconductor.org/packages/SomaticSignatures.git" + version('2.20.0', commit='dbedc30d92b600b3a17de596ebe38d15982c70c6') + version('2.18.0', commit='facccd67eee5202fcbe6ad32e667546546e7ccff') + version('2.16.0', commit='4ae348d9fa096c0ec307df95149991edf6044977') + version('2.14.0', commit='b12d24f86e96a7c6a17cbbad21ca14fa3aa7c60f') version('2.12.1', commit='932298c6877d076004de5541cec85a14e819517a') + depends_on('r@3.1.0:', type=('build', 'run')) depends_on('r-variantannotation', type=('build', 'run')) depends_on('r-genomicranges', type=('build', 'run')) depends_on('r-nmf', type=('build', 'run')) @@ -30,4 +37,3 @@ class RSomaticsignatures(RPackage): depends_on('r-pcamethods', type=('build', 'run')) depends_on('r-biobase', type=('build', 'run')) depends_on('r-proxy', type=('build', 'run')) - depends_on('r@3.4.0:3.4.9', when='@2.12.1') |