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Diffstat (limited to 'var/spack/repos/builtin/packages/r-tfmpvalue/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-tfmpvalue/package.py | 24 |
1 files changed, 24 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-tfmpvalue/package.py b/var/spack/repos/builtin/packages/r-tfmpvalue/package.py new file mode 100644 index 0000000000..d3304686b2 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-tfmpvalue/package.py @@ -0,0 +1,24 @@ +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class RTfmpvalue(RPackage): + """In putative Transcription Factor Binding Sites (TFBSs) identification + from sequence/alignments, we are interested in the significance of + certain match score. TFMPvalue provides the accurate calculation of + P-value with score threshold for Position Weight Matrices, or the score + with given P-value. This package is an interface to code originally + made available by Helene Touzet and Jean-Stephane Varre, 2007, + Algorithms Mol Biol:2, 15.""" + + homepage = "https://github.com/ge11232002/TFMPvalue" + url = "https://cran.rstudio.com/src/contrib/TFMPvalue_0.0.6.tar.gz" + list_url = "https://cran.rstudio.com/src/contrib/Archive/TFMPvalue" + + version('0.0.6', '69fdf4f9b9a0f408a5cee9ce34bea261') + + depends_on('r-rcpp@0.11.1:', type=('build', 'run')) |