diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/r-uwot/package.py')
-rw-r--r-- | var/spack/repos/builtin/packages/r-uwot/package.py | 35 |
1 files changed, 35 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-uwot/package.py b/var/spack/repos/builtin/packages/r-uwot/package.py new file mode 100644 index 0000000000..092288646d --- /dev/null +++ b/var/spack/repos/builtin/packages/r-uwot/package.py @@ -0,0 +1,35 @@ +# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class RUwot(RPackage): + """An implementation of the Uniform Manifold Approximation and Projection + dimensionality reduction by McInnes et al. (2018) <arXiv:1802.03426>. It + also provides means to transform new data and to carry out supervised + dimensionality reduction. An implementation of the related LargeVis method + of Tang et al. (2016) <arXiv:1602.00370> is also provided. This is a + complete re-implementation in R (and C++, via the 'Rcpp' package): no + Python installation is required. See the uwot website + (<https://github.com/jlmelville/uwot>) for more documentation and + examples.""" + + homepage = "https://github.com/jlmelville/uwot" + url = "https://cloud.r-project.org/src/contrib/uwot_0.1.3.tar.gz" + list_url = "https://cloud.r-project.org/src/contrib/Archive/uwot" + + version('0.1.3', sha256='4936e6922444cae8a71735e945b6bb0828a1012232eb94568054f78451c406d7') + + depends_on('r-matrix', type=('build', 'run')) + depends_on('r-rcpp', type=('build', 'run')) + depends_on('r-fnn', type=('build', 'run')) + depends_on('r-rspectra', type=('build', 'run')) + depends_on('r-rcppannoy@0.0.11:', type=('build', 'run')) + depends_on('r-rcppparallel', type=('build', 'run')) + depends_on('r-irlba', type=('build', 'run')) + depends_on('r-rcppprogress', type=('build', 'run')) + depends_on('r-dqrng', type=('build', 'run')) + depends_on('gmake', type='build') |