diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/salmon/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/salmon/package.py | 35 |
1 files changed, 11 insertions, 24 deletions
diff --git a/var/spack/repos/builtin/packages/salmon/package.py b/var/spack/repos/builtin/packages/salmon/package.py index a323aa1dab..06bfd70324 100644 --- a/var/spack/repos/builtin/packages/salmon/package.py +++ b/var/spack/repos/builtin/packages/salmon/package.py @@ -1,27 +1,8 @@ -############################################################################## -# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. # -# This file is part of Spack. -# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://github.com/spack/spack -# Please also see the NOTICE and LICENSE files for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU Lesser General Public License (as -# published by the Free Software Foundation) version 2.1, February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU Lesser General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public -# License along with this program; if not, write to the Free Software -# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + from spack import * @@ -32,9 +13,15 @@ class Salmon(CMakePackage): homepage = "http://combine-lab.github.io/salmon/" url = "https://github.com/COMBINE-lab/salmon/archive/v0.8.2.tar.gz" + version('0.9.1', '1277b8ed65d2c6982ed176a496a2a1e3') version('0.8.2', 'ee512697bc44b13661a16d4e14cf0a00') - depends_on('boost') + depends_on('tbb') + depends_on('boost@:1.66.0') + + def patch(self): + # remove static linking to libstdc++ + filter_file('-static-libstdc++', '', 'CMakeLists.txt', string=True) def cmake_args(self): args = ['-DBOOST_ROOT=%s' % self.spec['boost'].prefix] |