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Diffstat (limited to 'var/spack/repos/builtin/packages/samtools/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/samtools/package.py | 18 |
1 files changed, 18 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/samtools/package.py b/var/spack/repos/builtin/packages/samtools/package.py new file mode 100644 index 0000000000..72900398d8 --- /dev/null +++ b/var/spack/repos/builtin/packages/samtools/package.py @@ -0,0 +1,18 @@ +from spack import * + +class Samtools(Package): + """SAM Tools provide various utilities for manipulating alignments in the SAM format, + including sorting, merging, indexing and generating + alignments in a per-position format""" + + homepage = "www.htslib.org" + version('1.2','988ec4c3058a6ceda36503eebecd4122',url = "https://github.com/samtools/samtools/releases/download/1.2/samtools-1.2.tar.bz2") + + depends_on("zlib") + depends_on("mpc") + parallel=False + patch("samtools1.2.patch",level=0) + + def install(self, spec, prefix): + make("prefix=%s" % prefix, "install") + |