diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/sga/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/sga/package.py | 52 |
1 files changed, 26 insertions, 26 deletions
diff --git a/var/spack/repos/builtin/packages/sga/package.py b/var/spack/repos/builtin/packages/sga/package.py index 423ce76dd0..b830071468 100644 --- a/var/spack/repos/builtin/packages/sga/package.py +++ b/var/spack/repos/builtin/packages/sga/package.py @@ -8,35 +8,35 @@ from spack.package import * class Sga(AutotoolsPackage): """SGA is a de novo genome assembler based on the concept of string graphs. - The major goal of SGA is to be very memory efficient, which is achieved - by using a compressed representation of DNA sequence reads.""" + The major goal of SGA is to be very memory efficient, which is achieved + by using a compressed representation of DNA sequence reads.""" homepage = "https://www.msi.umn.edu/sw/sga" - url = "https://github.com/jts/sga/archive/v0.10.15.tar.gz" - - version('0.10.15', sha256='1b18996e6ec47985bc4889a8cbc3cd4dd3a8c7d385ae9f450bd474e36342558b') - version('0.10.14', sha256='763c011b302e1085048c93d917f081ea9348a8470e222dfd369064548e8b3994') - version('0.10.13', sha256='77859ab233980594941aa4c4cb5c2cbe1f5c43f2519f329c3a88a97865dee599') - version('0.10.12', sha256='f27f13ce1e7c1a3f35f9f4eed6c1896f3b92471bc4acc7f2364a12ce098e9779') - version('0.10.11', sha256='4704ad74705931311ed66a0886453e57616798147d149e16e13ac5acd9b5b87c') - version('0.10.10', sha256='5a75a81d405d22d51f3b7388c42d5baced4388110d39e5d77249bf3eac76a83a') - version('0.10.9', sha256='34573cb7423affd5e15c1175d9af69f7495b094b60ddfcbafd910fd703c25006') - version('0.10.8', sha256='55c5e0e425e14902e83d68cfb8cee4c86ee186459e54113a484b2a1b06d223c8') - version('0.10.3', sha256='c000823a58428d9db2979b30a571ad89aec78a8cb1af60bae1ce252dd4e8adac') - - depends_on('zlib') - depends_on('sparsehash') - depends_on('jemalloc') - depends_on('bamtools') - depends_on('autoconf', type='build') - depends_on('automake', type='build') - depends_on('libtool', type='build') - - configure_directory = 'src' + url = "https://github.com/jts/sga/archive/v0.10.15.tar.gz" + + version("0.10.15", sha256="1b18996e6ec47985bc4889a8cbc3cd4dd3a8c7d385ae9f450bd474e36342558b") + version("0.10.14", sha256="763c011b302e1085048c93d917f081ea9348a8470e222dfd369064548e8b3994") + version("0.10.13", sha256="77859ab233980594941aa4c4cb5c2cbe1f5c43f2519f329c3a88a97865dee599") + version("0.10.12", sha256="f27f13ce1e7c1a3f35f9f4eed6c1896f3b92471bc4acc7f2364a12ce098e9779") + version("0.10.11", sha256="4704ad74705931311ed66a0886453e57616798147d149e16e13ac5acd9b5b87c") + version("0.10.10", sha256="5a75a81d405d22d51f3b7388c42d5baced4388110d39e5d77249bf3eac76a83a") + version("0.10.9", sha256="34573cb7423affd5e15c1175d9af69f7495b094b60ddfcbafd910fd703c25006") + version("0.10.8", sha256="55c5e0e425e14902e83d68cfb8cee4c86ee186459e54113a484b2a1b06d223c8") + version("0.10.3", sha256="c000823a58428d9db2979b30a571ad89aec78a8cb1af60bae1ce252dd4e8adac") + + depends_on("zlib") + depends_on("sparsehash") + depends_on("jemalloc") + depends_on("bamtools") + depends_on("autoconf", type="build") + depends_on("automake", type="build") + depends_on("libtool", type="build") + + configure_directory = "src" def configure_args(self): return [ - '--with-sparsehash={0}'.format(self.spec['sparsehash'].prefix), - '--with-bamtools={0}'.format(self.spec['bamtools'].prefix), - '--with-jemalloc={0}'.format(self.spec['jemalloc'].prefix) + "--with-sparsehash={0}".format(self.spec["sparsehash"].prefix), + "--with-bamtools={0}".format(self.spec["bamtools"].prefix), + "--with-jemalloc={0}".format(self.spec["jemalloc"].prefix), ] |