diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/shoremap/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/shoremap/package.py | 28 |
1 files changed, 13 insertions, 15 deletions
diff --git a/var/spack/repos/builtin/packages/shoremap/package.py b/var/spack/repos/builtin/packages/shoremap/package.py index 84305f14e4..7497bd47c4 100644 --- a/var/spack/repos/builtin/packages/shoremap/package.py +++ b/var/spack/repos/builtin/packages/shoremap/package.py @@ -8,28 +8,26 @@ from spack.package import * class Shoremap(MakefilePackage): """SHOREmap is a computational tool implementing a method that enables - simple and straightforward mapping-by-sequencing analysis. + simple and straightforward mapping-by-sequencing analysis. - Whole genome resequencing of pools of recombinant mutant genomes allows - directly linking phenotypic traits to causal mutations. Such an - analysis, called mapping-by-sequencing, combines classical genetic - mapping and next generation sequencing by relying on selection-induced - patterns within genome-wide allele frequency in pooled genomes.""" + Whole genome resequencing of pools of recombinant mutant genomes allows + directly linking phenotypic traits to causal mutations. Such an + analysis, called mapping-by-sequencing, combines classical genetic + mapping and next generation sequencing by relying on selection-induced + patterns within genome-wide allele frequency in pooled genomes.""" homepage = "http://bioinfo.mpipz.mpg.de/shoremap/" - url = "http://bioinfo.mpipz.mpg.de/shoremap/SHOREmap_v3.6.tar.gz" + url = "http://bioinfo.mpipz.mpg.de/shoremap/SHOREmap_v3.6.tar.gz" - version('3.6', sha256='0da4179e92cbc68434a9d8eff7bd5fff55c89fd9a543a2db6bd0f69074f2ec70') + version("3.6", sha256="0da4179e92cbc68434a9d8eff7bd5fff55c89fd9a543a2db6bd0f69074f2ec70") - depends_on('dislin') + depends_on("dislin") def edit(self, spec, prefix): - makefile = FileFilter('makefile') - makefile.filter(r'-L/usr/lib/', - self.spec['libxt'].libs.search_flags) - makefile.filter(r'-L\./dislin.* -ldislin_d', - self.spec['dislin:d'].libs.ld_flags) + makefile = FileFilter("makefile") + makefile.filter(r"-L/usr/lib/", self.spec["libxt"].libs.search_flags) + makefile.filter(r"-L\./dislin.* -ldislin_d", self.spec["dislin:d"].libs.ld_flags) def install(self, spec, prefix): mkdirp(prefix.bin) - install('SHOREmap', prefix.bin) + install("SHOREmap", prefix.bin) |