diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/star/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/star/package.py | 44 |
1 files changed, 24 insertions, 20 deletions
diff --git a/var/spack/repos/builtin/packages/star/package.py b/var/spack/repos/builtin/packages/star/package.py index 0596e78796..957a319d24 100644 --- a/var/spack/repos/builtin/packages/star/package.py +++ b/var/spack/repos/builtin/packages/star/package.py @@ -10,28 +10,32 @@ class Star(Package): """STAR is an ultrafast universal RNA-seq aligner.""" homepage = "https://github.com/alexdobin/STAR" - url = "https://github.com/alexdobin/STAR/archive/2.7.6a.tar.gz" + url = "https://github.com/alexdobin/STAR/archive/2.7.6a.tar.gz" - version('2.7.6a', sha256='9320797c604673debea0fe8f2e3762db364915cc59755de1a0d87c8018f97d51') - version('2.7.0e', sha256='2fc9d9103bd02811904d41e3a3d50e47c7de17cb55c3b4880ea5f39300a9ba0d') - version('2.7.0d', sha256='7a757478868dc73fe7619bf6ea302dd642bd30e1c8c1fb4acdbe7fa151cf9fd1') - version('2.6.1b', sha256='1bba5b26c1e6e9a7aca8473a99dbf37bad1dbdd0a589402448e278553bb6b3da') - version('2.6.1a', sha256='dc87357211432c05123ce49966aae712dec590cbe27c1fd0193c3aeb8d4abe4b') - version('2.6.0c', sha256='bebba6cc72da302429c44c20f3b07bdde6b0ddf33e538a99e297f1d342070387') - version('2.6.0b', sha256='1ebbecbb698a3de95990b35fe386189a2c00b07cd9d2d4e017ab8234e7dc042e') - version('2.6.0a', sha256='a6b0dd1918e1961eebec71e6c7c3c8e632f66d10e0620aa09c0710e2ab279179') - version('2.5.4b', sha256='bfa6ccd3b7b3878155a077a9c15eec5490dffad8e077ac93abe6f9bfa75bb2b4') - version('2.5.4a', sha256='17b02703cdd580c9fd426a14f20712ea252d32a4ded804eef759029b600e3afb') - version('2.5.3a', sha256='2a258e77cda103aa293e528f8597f25dc760cba188d0a7bc7c9452f4698e7c04') - version('2.5.2b', sha256='f88b992740807ab10f2ac3b83781bf56951617f210001fab523f6480d0b546d9') - version('2.5.2a', sha256='2a372d9bcab1dac8d35cbbed3f0ab58291e4fbe99d6c1842b094ba7449d55476') - version('2.4.2a', sha256='ac166d190c0fd34bf3418a5640050b0e7734d279813e02daa013d0924fb579b0', url='https://github.com/alexdobin/STAR/archive/STAR_2.4.2a.tar.gz') + version("2.7.6a", sha256="9320797c604673debea0fe8f2e3762db364915cc59755de1a0d87c8018f97d51") + version("2.7.0e", sha256="2fc9d9103bd02811904d41e3a3d50e47c7de17cb55c3b4880ea5f39300a9ba0d") + version("2.7.0d", sha256="7a757478868dc73fe7619bf6ea302dd642bd30e1c8c1fb4acdbe7fa151cf9fd1") + version("2.6.1b", sha256="1bba5b26c1e6e9a7aca8473a99dbf37bad1dbdd0a589402448e278553bb6b3da") + version("2.6.1a", sha256="dc87357211432c05123ce49966aae712dec590cbe27c1fd0193c3aeb8d4abe4b") + version("2.6.0c", sha256="bebba6cc72da302429c44c20f3b07bdde6b0ddf33e538a99e297f1d342070387") + version("2.6.0b", sha256="1ebbecbb698a3de95990b35fe386189a2c00b07cd9d2d4e017ab8234e7dc042e") + version("2.6.0a", sha256="a6b0dd1918e1961eebec71e6c7c3c8e632f66d10e0620aa09c0710e2ab279179") + version("2.5.4b", sha256="bfa6ccd3b7b3878155a077a9c15eec5490dffad8e077ac93abe6f9bfa75bb2b4") + version("2.5.4a", sha256="17b02703cdd580c9fd426a14f20712ea252d32a4ded804eef759029b600e3afb") + version("2.5.3a", sha256="2a258e77cda103aa293e528f8597f25dc760cba188d0a7bc7c9452f4698e7c04") + version("2.5.2b", sha256="f88b992740807ab10f2ac3b83781bf56951617f210001fab523f6480d0b546d9") + version("2.5.2a", sha256="2a372d9bcab1dac8d35cbbed3f0ab58291e4fbe99d6c1842b094ba7449d55476") + version( + "2.4.2a", + sha256="ac166d190c0fd34bf3418a5640050b0e7734d279813e02daa013d0924fb579b0", + url="https://github.com/alexdobin/STAR/archive/STAR_2.4.2a.tar.gz", + ) - depends_on('zlib') + depends_on("zlib") def install(self, spec, prefix): - with working_dir('source'): - make('STAR', 'STARlong') + with working_dir("source"): + make("STAR", "STARlong") mkdirp(prefix.bin) - install('STAR', prefix.bin) - install('STARlong', prefix.bin) + install("STAR", prefix.bin) + install("STARlong", prefix.bin) |