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Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/py-bakta/package.py | 36 |
1 files changed, 36 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/py-bakta/package.py b/var/spack/repos/builtin/packages/py-bakta/package.py new file mode 100644 index 0000000000..50e683c86c --- /dev/null +++ b/var/spack/repos/builtin/packages/py-bakta/package.py @@ -0,0 +1,36 @@ +# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + + +from spack.package import * + + +class PyBakta(PythonPackage): + """Bakta: rapid & standardized annotation + of bacterial genomes, MAGs & plasmids""" + + homepage = "https://github.com/oschwengers/bakta" + pypi = "bakta/bakta-1.5.1.tar.gz" + + maintainers = ["oschwengers"] + + version("1.5.1", sha256="36781612c4eaa99e6e24a00e8ab5b27dadf21c98ae6d16432f3e78c96a4adb5d") + + depends_on("python@3.8:", type=("build", "run")) + depends_on("py-setuptools", type=("build", "run")) + depends_on("py-biopython@1.78:", type=("build", "run")) + depends_on("py-xopen@1.1.0:", type=("build", "run")) + depends_on("py-requests@2.25.1:", type=("build", "run")) + depends_on("py-alive-progress@1.6.2", type=("build", "run")) + depends_on("trnascan-se@2.0.8:", type=("build", "run")) + depends_on("aragorn@1.2.38:", type=("build", "run")) + depends_on("infernal@1.1.4:", type=("build", "run")) + depends_on("pilercr@1.06:", type=("build", "run")) + depends_on("prodigal@2.6.3:", type=("build", "run")) + depends_on("hmmer@3.3.2:", type=("build", "run")) + depends_on("diamond@2.0.14:", type=("build", "run")) + depends_on("blast-plus@2.12.0:", type=("build", "run")) + depends_on("amrfinder@3.10.23:", type=("build", "run")) + depends_on("py-deepsig-biocomp@1.2.5:", type=("build", "run")) |