diff options
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/htslib/package.py | 21 |
1 files changed, 19 insertions, 2 deletions
diff --git a/var/spack/repos/builtin/packages/htslib/package.py b/var/spack/repos/builtin/packages/htslib/package.py index df54392a0a..95c38d4a23 100644 --- a/var/spack/repos/builtin/packages/htslib/package.py +++ b/var/spack/repos/builtin/packages/htslib/package.py @@ -10,7 +10,9 @@ class Htslib(AutotoolsPackage): """C library for high-throughput sequencing data formats.""" homepage = "https://github.com/samtools/htslib" + url = "https://github.com/samtools/htslib/releases/download/1.10.2/htslib-1.10.2.tar.bz2" + version('1.10.2', sha256='e3b543de2f71723830a1e0472cf5489ec27d0fbeb46b1103e14a11b7177d1939') version('1.9', sha256='e04b877057e8b3b8425d957f057b42f0e8509173621d3eccaedd0da607d9929a') version('1.8', sha256='c0ef1eec954a98cc708e9f99f6037db85db45670b52b6ab37abcc89b6c057ca1') version('1.7', sha256='be3d4e25c256acdd41bebb8a7ad55e89bb18e2fc7fc336124b1e2c82ae8886c6') @@ -20,9 +22,15 @@ class Htslib(AutotoolsPackage): version('1.3.1', sha256='49d53a2395b8cef7d1d11270a09de888df8ba06f70fe68282e8235ee04124ae6') version('1.2', sha256='125c01421d5131afb4c3fd2bc9c7da6f4f1cd9ab5fc285c076080b9aca24bffc') + variant('libcurl', + default=True, + description='Enable libcurl-based support for http/https/etc URLs,' + ' for versions >= 1.3. This also enables S3 and GCS support.') + depends_on('zlib') - depends_on('bzip2', when="@1.4:") - depends_on('xz', when="@1.4:") + depends_on('bzip2', when='@1.4:') + depends_on('xz', when='@1.4:') + depends_on('curl', when='@1.3:+libcurl') depends_on('m4', when="@1.2") depends_on('autoconf', when="@1.2") @@ -37,3 +45,12 @@ class Htslib(AutotoolsPackage): else: url = "https://github.com/samtools/htslib/releases/download/{0}/htslib-{0}.tar.bz2" return url.format(version.dotted) + + def configure_args(self): + spec = self.spec + args = [] + + if spec.satisfies('@1.3:'): + args.extend(self.enable_or_disable('libcurl')) + + return args |