diff options
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/augustus/bam2wig_Makefile.patch | 2 | ||||
| -rw-r--r-- | var/spack/repos/builtin/packages/augustus/package.py | 1 |
2 files changed, 2 insertions, 1 deletions
diff --git a/var/spack/repos/builtin/packages/augustus/bam2wig_Makefile.patch b/var/spack/repos/builtin/packages/augustus/bam2wig_Makefile.patch index bbd5bfeef6..45dce94cc3 100644 --- a/var/spack/repos/builtin/packages/augustus/bam2wig_Makefile.patch +++ b/var/spack/repos/builtin/packages/augustus/bam2wig_Makefile.patch @@ -17,7 +17,7 @@ - HTSERRHINT:=$(HTSERRHINT)"Check if HTSlib is installed and of version 1.10 or higher - see README.txt" -endif +INCLUDES=-I$(HTSLIBDIR)/include/htslib -+HTSLIBS=-L$(HTSLIBDIR)/lib -Wl,-rpath,$(HTSLIBDIR)/lib -lhts -lcurses -lm -lz -lpthread -lcurl -lssl -lcrypto -lbz2 -llzma ++HTSLIBS=-L$(HTSLIBDIR)/lib -Wl,-rpath,$(HTSLIBDIR)/lib -lhts -lncurses -lm -lz -lpthread -lcurl -lssl -lcrypto -lbz2 -llzma CFLAGS:=-Wall -O2 $(CFLAGS) CC?=gcc diff --git a/var/spack/repos/builtin/packages/augustus/package.py b/var/spack/repos/builtin/packages/augustus/package.py index c5bcd71f18..b158c5b346 100644 --- a/var/spack/repos/builtin/packages/augustus/package.py +++ b/var/spack/repos/builtin/packages/augustus/package.py @@ -39,6 +39,7 @@ class Augustus(MakefilePackage): depends_on('htslib') depends_on('bcftools') depends_on('samtools') + depends_on('ncurses') depends_on('curl', when='@3.3.1:') depends_on('sqlite', when='@3.4.0:') depends_on('mysql-client', when='@3.4.0:') |