diff options
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-genefilter/package.py | 38 |
1 files changed, 38 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-genefilter/package.py b/var/spack/repos/builtin/packages/r-genefilter/package.py new file mode 100644 index 0000000000..1d2e4fa4b2 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-genefilter/package.py @@ -0,0 +1,38 @@ +############################################################################## +# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class RGenefilter(RPackage): + """Some basic functions for filtering genes""" + + homepage = "https://bioconductor.org/packages/genefilter/" + url = "https://www.bioconductor.org/packages/release/bioc/src/contrib/genefilter_1.58.1.tar.gz" + list_url = homepage + version('1.58.1', 'bc1a90bdf93d8db994220545cd80f438') + depends_on('r-s4vectors', type=('build', 'run')) + depends_on('r-annotationdbi', type=('build', 'run')) + depends_on('r-annotate', type=('build', 'run')) + depends_on('r-biobase', type=('build', 'run')) |