summaryrefslogtreecommitdiff
path: root/var
diff options
context:
space:
mode:
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/dealii/package.py200
1 files changed, 107 insertions, 93 deletions
diff --git a/var/spack/repos/builtin/packages/dealii/package.py b/var/spack/repos/builtin/packages/dealii/package.py
index 068dbec10a..e7984466ba 100644
--- a/var/spack/repos/builtin/packages/dealii/package.py
+++ b/var/spack/repos/builtin/packages/dealii/package.py
@@ -37,7 +37,7 @@ class Dealii(Package):
version('8.3.0', 'fc6cdcb16309ef4bea338a4f014de6fa')
version('8.2.1', '71c728dbec14f371297cd405776ccf08')
version('8.1.0', 'aa8fadc2ce5eb674f44f997461bf668d')
- version('dev', git='https://github.com/dealii/dealii.git')
+ version('develop', git='https://github.com/dealii/dealii.git')
variant('mpi', default=True, description='Compile with MPI')
variant('arpack', default=True, description='Compile with Arpack and PArpack (only with MPI)')
@@ -73,20 +73,21 @@ class Dealii(Package):
depends_on("doxygen+graphviz", when='+doc')
depends_on("graphviz", when='+doc')
depends_on("gsl", when='@8.5.0:+gsl')
- depends_on("gsl", when='@dev+gsl')
depends_on("hdf5+mpi", when='+hdf5+mpi')
depends_on("metis@5:", when='+metis')
depends_on("netcdf+mpi", when="+netcdf+mpi")
depends_on("netcdf-cxx", when='+netcdf+mpi')
depends_on("oce", when='+oce')
depends_on("p4est", when='+p4est+mpi')
- depends_on("petsc@:3.6.4+mpi", when='+petsc+mpi') # FIXME: update after 3.7 is supported upstream. # NOQA: ignore=E501
- depends_on("slepc@:3.6.3", when='+slepc+petsc+mpi')
+ depends_on("petsc+mpi", when='@8.5.0:+petsc+mpi')
+ depends_on("slepc", when='@8.5.0:+slepc+petsc+mpi')
+ depends_on("petsc@:3.6.4+mpi", when='@:8.4.1+petsc+mpi')
+ depends_on("slepc@:3.6.3", when='@:8.4.1+slepc+petsc+mpi')
depends_on("trilinos", when='+trilinos+mpi')
# developer dependnecies
- depends_on("numdiff", when='@dev')
- depends_on("astyle@2.04", when='@dev')
+ depends_on("numdiff", when='@develop')
+ depends_on("astyle@2.04", when='@develop')
def install(self, spec, prefix):
options = []
@@ -119,6 +120,16 @@ class Dealii(Package):
'-DZLIB_DIR=%s' % spec['zlib'].prefix
])
+ # Set directory structure:
+ if spec.satisfies('@:8.2.1'):
+ options.extend(['-DDEAL_II_COMPONENT_COMPAT_FILES=OFF'])
+ else:
+ options.extend([
+ '-DDEAL_II_EXAMPLES_RELDIR=share/deal.II/examples',
+ '-DDEAL_II_DOCREADME_RELDIR=share/deal.II/',
+ '-DDEAL_II_DOCHTML_RELDIR=share/deal.II/doc'
+ ])
+
# MPI
if '+mpi' in spec:
options.extend([
@@ -193,115 +204,118 @@ class Dealii(Package):
])
cmake('.', *options)
-
make()
- make("test")
+ if self.run_tests:
+ make("test")
make("install")
# run some MPI examples with different solvers from PETSc and Trilinos
- env['DEAL_II_DIR'] = prefix
- print('=====================================')
- print('============ EXAMPLES ===============')
- print('=====================================')
- # take bare-bones step-3
- print('=====================================')
- print('============ Step-3 =================')
- print('=====================================')
- with working_dir('examples/step-3'):
- cmake('.')
- make('release')
- make('run', parallel=False)
-
- # An example which uses Metis + PETSc
- # FIXME: switch step-18 to MPI
- with working_dir('examples/step-18'):
+ if self.run_tests:
+ env['DEAL_II_DIR'] = prefix
print('=====================================')
- print('============= Step-18 ===============')
+ print('============ EXAMPLES ===============')
print('=====================================')
- # list the number of cycles to speed up
- filter_file(r'(end_time = 10;)', ('end_time = 3;'), 'step-18.cc')
- if '^petsc' in spec and '^metis' in spec:
- cmake('.')
- make('release')
- make('run', parallel=False)
-
- # take step-40 which can use both PETSc and Trilinos
- # FIXME: switch step-40 to MPI run
- with working_dir('examples/step-40'):
+ # take bare-bones step-3
print('=====================================')
- print('========== Step-40 PETSc ============')
+ print('============ Step-3 =================')
print('=====================================')
- # list the number of cycles to speed up
- filter_file(r'(const unsigned int n_cycles = 8;)',
- ('const unsigned int n_cycles = 2;'), 'step-40.cc')
- cmake('.')
- if '^petsc' in spec:
+ with working_dir('examples/step-3'):
+ cmake('.')
make('release')
make('run', parallel=False)
- print('=====================================')
- print('========= Step-40 Trilinos ==========')
- print('=====================================')
- # change Linear Algebra to Trilinos
- # The below filter_file should be different for versions
- # before and after 8.4.0
- if spec.satisfies('@8.4.0:') or spec.satisfies('@dev'):
- filter_file(r'(\/\/ #define FORCE_USE_OF_TRILINOS.*)',
- ('#define FORCE_USE_OF_TRILINOS'), 'step-40.cc')
- else:
- filter_file(r'(#define USE_PETSC_LA.*)',
- ('// #define USE_PETSC_LA'), 'step-40.cc')
- if '^trilinos+hypre' in spec:
- make('release')
- make('run', parallel=False)
+ # An example which uses Metis + PETSc
+ # FIXME: switch step-18 to MPI
+ with working_dir('examples/step-18'):
+ print('=====================================')
+ print('============= Step-18 ===============')
+ print('=====================================')
+ # list the number of cycles to speed up
+ filter_file(r'(end_time = 10;)', ('end_time = 3;'),
+ 'step-18.cc')
+ if '^petsc' in spec and '^metis' in spec:
+ cmake('.')
+ make('release')
+ make('run', parallel=False)
- # the rest of the tests on step 40 only works for
- # dealii version 8.4.0 and after
- if spec.satisfies('@8.4.0:') or spec.satisfies('@dev'):
+ # take step-40 which can use both PETSc and Trilinos
+ # FIXME: switch step-40 to MPI run
+ with working_dir('examples/step-40'):
print('=====================================')
- print('=== Step-40 Trilinos SuperluDist ====')
+ print('========== Step-40 PETSc ============')
print('=====================================')
- # change to direct solvers
- filter_file(r'(LA::SolverCG solver\(solver_control\);)', ('TrilinosWrappers::SolverDirect::AdditionalData data(false,"Amesos_Superludist"); TrilinosWrappers::SolverDirect solver(solver_control,data);'), 'step-40.cc') # NOQA: ignore=E501
- filter_file(r'(LA::MPI::PreconditionAMG preconditioner;)',
- (''), 'step-40.cc')
- filter_file(r'(LA::MPI::PreconditionAMG::AdditionalData data;)', # NOQA: ignore=E501
- (''), 'step-40.cc')
- filter_file(r'(preconditioner.initialize\(system_matrix, data\);)', # NOQA: ignore=E501
- (''), 'step-40.cc')
- filter_file(r'(solver\.solve \(system_matrix, completely_distributed_solution, system_rhs,)', ('solver.solve (system_matrix, completely_distributed_solution, system_rhs);'), 'step-40.cc') # NOQA: ignore=E501
- filter_file(r'(preconditioner\);)', (''), 'step-40.cc')
- if '^trilinos+superlu-dist' in spec:
+ # list the number of cycles to speed up
+ filter_file(r'(const unsigned int n_cycles = 8;)',
+ ('const unsigned int n_cycles = 2;'), 'step-40.cc')
+ cmake('.')
+ if '^petsc' in spec:
make('release')
- make('run', paralle=False)
+ make('run', parallel=False)
print('=====================================')
- print('====== Step-40 Trilinos MUMPS =======')
+ print('========= Step-40 Trilinos ==========')
print('=====================================')
- # switch to Mumps
- filter_file(r'(Amesos_Superludist)',
- ('Amesos_Mumps'), 'step-40.cc')
- if '^trilinos+mumps' in spec:
+ # change Linear Algebra to Trilinos
+ # The below filter_file should be different for versions
+ # before and after 8.4.0
+ if spec.satisfies('@8.4.0:'):
+ filter_file(r'(\/\/ #define FORCE_USE_OF_TRILINOS.*)',
+ ('#define FORCE_USE_OF_TRILINOS'),
+ 'step-40.cc')
+ else:
+ filter_file(r'(#define USE_PETSC_LA.*)',
+ ('// #define USE_PETSC_LA'), 'step-40.cc')
+ if '^trilinos+hypre' in spec:
make('release')
make('run', parallel=False)
- print('=====================================')
- print('============ Step-36 ================')
- print('=====================================')
- with working_dir('examples/step-36'):
- if 'slepc' in spec:
- cmake('.')
- make('release')
- make('run', parallel=False)
+ # the rest of the tests on step 40 only works for
+ # dealii version 8.4.0 and after
+ if spec.satisfies('@8.4.0:'):
+ print('=====================================')
+ print('=== Step-40 Trilinos SuperluDist ====')
+ print('=====================================')
+ # change to direct solvers
+ filter_file(r'(LA::SolverCG solver\(solver_control\);)', ('TrilinosWrappers::SolverDirect::AdditionalData data(false,"Amesos_Superludist"); TrilinosWrappers::SolverDirect solver(solver_control,data);'), 'step-40.cc') # NOQA: ignore=E501
+ filter_file(r'(LA::MPI::PreconditionAMG preconditioner;)',
+ (''), 'step-40.cc')
+ filter_file(r'(LA::MPI::PreconditionAMG::AdditionalData data;)', # NOQA: ignore=E501
+ (''), 'step-40.cc')
+ filter_file(r'(preconditioner.initialize\(system_matrix, data\);)', # NOQA: ignore=E501
+ (''), 'step-40.cc')
+ filter_file(r'(solver\.solve \(system_matrix, completely_distributed_solution, system_rhs,)', ('solver.solve (system_matrix, completely_distributed_solution, system_rhs);'), 'step-40.cc') # NOQA: ignore=E501
+ filter_file(r'(preconditioner\);)', (''), 'step-40.cc')
+ if '^trilinos+superlu-dist' in spec:
+ make('release')
+ make('run', paralle=False)
- print('=====================================')
- print('============ Step-54 ================')
- print('=====================================')
- with working_dir('examples/step-54'):
- if 'oce' in spec:
- cmake('.')
- make('release')
- make('run', parallel=False)
+ print('=====================================')
+ print('====== Step-40 Trilinos MUMPS =======')
+ print('=====================================')
+ # switch to Mumps
+ filter_file(r'(Amesos_Superludist)',
+ ('Amesos_Mumps'), 'step-40.cc')
+ if '^trilinos+mumps' in spec:
+ make('release')
+ make('run', parallel=False)
+
+ print('=====================================')
+ print('============ Step-36 ================')
+ print('=====================================')
+ with working_dir('examples/step-36'):
+ if 'slepc' in spec:
+ cmake('.')
+ make('release')
+ make('run', parallel=False)
+
+ print('=====================================')
+ print('============ Step-54 ================')
+ print('=====================================')
+ with working_dir('examples/step-54'):
+ if 'oce' in spec:
+ cmake('.')
+ make('release')
+ make('run', parallel=False)
def setup_environment(self, spack_env, env):
env.set('DEAL_II_DIR', self.prefix)
generated by cgit v1.2.3-70-g09d2 (git 2.46.0) at 2024-11-09 19:33:41 +0000