diff options
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/bbmap/package.py | 7 |
1 files changed, 6 insertions, 1 deletions
diff --git a/var/spack/repos/builtin/packages/bbmap/package.py b/var/spack/repos/builtin/packages/bbmap/package.py index fd85b419cf..e232e9f395 100644 --- a/var/spack/repos/builtin/packages/bbmap/package.py +++ b/var/spack/repos/builtin/packages/bbmap/package.py @@ -10,11 +10,16 @@ class Bbmap(Package): """Short read aligner for DNA and RNA-seq data.""" homepage = "http://sourceforge.net/projects/bbmap/" - url = "https://downloads.sourceforge.net/project/bbmap/BBMap_37.36.tar.gz" + url = "https://downloads.sourceforge.net/project/bbmap/BBMap_38.63.tar.gz" + version('38.63', sha256='089064104526c8d696164aefa067f935b888bc71ef95527c72a98c17ee90a01f') version('37.36', '1e1086e1fae490a7d03c5a065b1c262f') depends_on('java') def install(self, spec, prefix): install_tree('.', prefix.bin) + + def setup_environment(self, spack_env, run_env): + run_env.set('BBMAP_CONFIG', self.prefix.bin.config) + run_env.set('BBMAP_RESOURCES', self.prefix.bin.resources) |