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-rw-r--r--var/spack/packages/cmake/package.py3
-rw-r--r--var/spack/packages/damselfly/package.py14
-rw-r--r--var/spack/packages/hdf5/package.py5
-rw-r--r--var/spack/packages/hwloc/package.py2
-rw-r--r--var/spack/packages/hypre/package.py4
-rw-r--r--var/spack/packages/jdk/package.py4
-rw-r--r--var/spack/packages/jemalloc/package.py14
-rw-r--r--var/spack/packages/judy/package.py15
-rw-r--r--var/spack/packages/lua/package.py4
-rw-r--r--var/spack/packages/openmpi/configure.patch31
-rw-r--r--var/spack/packages/openmpi/package.py9
-rw-r--r--var/spack/packages/openssl/package.py1
-rw-r--r--var/spack/packages/papi/package.py12
-rw-r--r--var/spack/packages/py-twisted/package.py16
-rw-r--r--var/spack/packages/rsync/package.py14
15 files changed, 134 insertions, 14 deletions
diff --git a/var/spack/packages/cmake/package.py b/var/spack/packages/cmake/package.py
index 9efa370c8b..fcfbca0705 100644
--- a/var/spack/packages/cmake/package.py
+++ b/var/spack/packages/cmake/package.py
@@ -34,6 +34,9 @@ class Cmake(Package):
version('3.0.2', 'db4c687a31444a929d2fdc36c4dfb95f',
url = 'http://www.cmake.org/files/v3.0/cmake-3.0.2.tar.gz')
+
+ version('3.4.0', 'cd3034e0a44256a0917e254167217fc8',
+ url = 'https://cmake.org/files/v3.4/cmake-3.4.0.tar.gz')
# version('3.0.1', 'e2e05d84cb44a42f1371d9995631dcf5')
# version('3.0.0', '21a1c85e1a3b803c4b48e7ff915a863e')
diff --git a/var/spack/packages/damselfly/package.py b/var/spack/packages/damselfly/package.py
new file mode 100644
index 0000000000..54df528c4a
--- /dev/null
+++ b/var/spack/packages/damselfly/package.py
@@ -0,0 +1,14 @@
+from spack import *
+
+class Damselfly(Package):
+ """Damselfly is a model-based parallel network simulator."""
+ homepage = "https://github.com/scalability-llnl/damselfly"
+ url = "https://github.com/scalability-llnl/damselfly"
+
+ version('1.0', '05cf7e2d8ece4408c0f2abb7ab63fd74c0d62895', git='https://github.com/scalability-llnl/damselfly.git', tag='v1.0')
+
+ def install(self, spec, prefix):
+ with working_dir('spack-build', create=True):
+ cmake('-DCMAKE_BUILD_TYPE=release', '..', *std_cmake_args)
+ make()
+ make('install')
diff --git a/var/spack/packages/hdf5/package.py b/var/spack/packages/hdf5/package.py
index 15e0ef9338..48997425cd 100644
--- a/var/spack/packages/hdf5/package.py
+++ b/var/spack/packages/hdf5/package.py
@@ -11,6 +11,7 @@ class Hdf5(Package):
list_url = "http://www.hdfgroup.org/ftp/HDF5/releases"
list_depth = 3
+ version('1.8.16', 'b8ed9a36ae142317f88b0c7ef4b9c618')
version('1.8.15', '03cccb5b33dbe975fdcd8ae9dc021f24')
version('1.8.13', 'c03426e9e77d7766944654280b467289')
@@ -25,8 +26,8 @@ class Hdf5(Package):
"--with-zlib=%s" % spec['zlib'].prefix,
"--enable-parallel",
"--enable-shared",
- "CC=%s" % spec['mpich'].prefix.bin + "/mpicc",
- "CXX=%s" % spec['mpich'].prefix.bin + "/mpic++")
+ "CC=%s" % spec['mpi'].prefix.bin + "/mpicc",
+ "CXX=%s" % spec['mpi'].prefix.bin + "/mpic++")
make()
make("install")
diff --git a/var/spack/packages/hwloc/package.py b/var/spack/packages/hwloc/package.py
index 31a31f376a..2f46399afd 100644
--- a/var/spack/packages/hwloc/package.py
+++ b/var/spack/packages/hwloc/package.py
@@ -15,6 +15,8 @@ class Hwloc(Package):
homepage = "http://www.open-mpi.org/projects/hwloc/"
url = "http://www.open-mpi.org/software/hwloc/v1.9/downloads/hwloc-1.9.tar.gz"
+ version('1.11.1', '002742efd3a8431f98d6315365a2b543',
+ url='http://www.open-mpi.org/software/hwloc/v1.11/downloads/hwloc-1.11.1.tar.bz2')
version('1.9', '1f9f9155682fe8946a97c08896109508')
def install(self, spec, prefix):
diff --git a/var/spack/packages/hypre/package.py b/var/spack/packages/hypre/package.py
index 198b3f00dc..0f7f14dd89 100644
--- a/var/spack/packages/hypre/package.py
+++ b/var/spack/packages/hypre/package.py
@@ -5,8 +5,8 @@ class Hypre(Package):
features parallel multigrid methods for both structured and
unstructured grid problems."""
- homepage = "https://computation.llnl.gov/project/linear_solvers/software.php"
- url = "https://computation.llnl.gov/project/linear_solvers/download/hypre-2.10.0b.tar.gz"
+ homepage = "http://computation.llnl.gov/project/linear_solvers/software.php"
+ url = "http://computation.llnl.gov/project/linear_solvers/download/hypre-2.10.0b.tar.gz"
version('2.10.0b', '768be38793a35bb5d055905b271f5b8e')
diff --git a/var/spack/packages/jdk/package.py b/var/spack/packages/jdk/package.py
index 8f8076dd14..f8f5fc21bd 100644
--- a/var/spack/packages/jdk/package.py
+++ b/var/spack/packages/jdk/package.py
@@ -14,8 +14,8 @@ class Jdk(Package):
in the form of a binary product aimed at Java developers."""
homepage = "http://www.oracle.com/technetwork/java/javase/downloads/index.html"
- version('8u25-linux-x64', 'e145c03a7edc845215092786bcfba77e',
- url="http://download.oracle.com/otn-pub/java/jdk/8u25-b17/jdk-8u25-linux-x64.tar.gz")
+ version('8u66-linux-x64', '88f31f3d642c3287134297b8c10e61bf',
+ url="http://download.oracle.com/otn-pub/java/jdk/8u66-b17/jdk-8u66-linux-x64.tar.gz")
# Oracle requires that you accept their License Agreement in order
# to access the Java packages in download.oracle.com. In order to
diff --git a/var/spack/packages/jemalloc/package.py b/var/spack/packages/jemalloc/package.py
new file mode 100644
index 0000000000..ff946ae821
--- /dev/null
+++ b/var/spack/packages/jemalloc/package.py
@@ -0,0 +1,14 @@
+from spack import *
+
+class Jemalloc(Package):
+ """jemalloc is a general purpose malloc(3) implementation that emphasizes fragmentation avoidance and scalable concurrency support."""
+ homepage = "http://www.canonware.com/jemalloc/"
+ url = "https://github.com/jemalloc/jemalloc/releases/download/4.0.4/jemalloc-4.0.4.tar.bz2"
+
+ version('4.0.4', '687c5cc53b9a7ab711ccd680351ff988')
+
+ def install(self, spec, prefix):
+ configure('--prefix=%s' % prefix)
+
+ make()
+ make("install")
diff --git a/var/spack/packages/judy/package.py b/var/spack/packages/judy/package.py
new file mode 100644
index 0000000000..b8d8701383
--- /dev/null
+++ b/var/spack/packages/judy/package.py
@@ -0,0 +1,15 @@
+from spack import *
+
+class Judy(Package):
+ """A general-purpose dynamic array, associative array and hash-trie - Judy"""
+ homepage = "http://judy.sourceforge.net/"
+ url = "http://downloads.sourceforge.net/project/judy/judy/Judy-1.0.5/Judy-1.0.5.tar.gz"
+
+ version('1.0.5', '115a0d26302676e962ae2f70ec484a54')
+ parallel = False
+
+ def install(self, spec, prefix):
+ configure('--prefix=%s' % prefix)
+
+ make()
+ make("install")
diff --git a/var/spack/packages/lua/package.py b/var/spack/packages/lua/package.py
index 57c443cc2d..fa4b4f9edc 100644
--- a/var/spack/packages/lua/package.py
+++ b/var/spack/packages/lua/package.py
@@ -22,5 +22,7 @@ class Lua(Package):
def install(self, spec, prefix):
make('INSTALL_TOP=%s' % prefix,
'MYLDFLAGS=-L%s/lib' % spec['ncurses'].prefix,
- 'linux',
+ 'linux')
+ make('INSTALL_TOP=%s' % prefix,
+ 'MYLDFLAGS=-L%s/lib' % spec['ncurses'].prefix,
'install')
diff --git a/var/spack/packages/openmpi/configure.patch b/var/spack/packages/openmpi/configure.patch
new file mode 100644
index 0000000000..18fb42c1d1
--- /dev/null
+++ b/var/spack/packages/openmpi/configure.patch
@@ -0,0 +1,31 @@
+This patch addresses <https://github.com/open-mpi/ompi/issues/576>.
+--- a/configure
++++ b/configure
+@@ -301130,10 +301130,11 @@
+ case ${prev}${p} in
+
+ -L* | -R* | -l*)
+- # Some compilers place space between "-{L,R}" and the path.
++ # Some compilers place space between "-{L,R,l}" and the path.
+ # Remove the space.
+ if test $p = "-L" ||
+- test $p = "-R"; then
++ test $p = "-R" ||
++ test $p = "-l"; then
+ prev=$p
+ continue
+ fi
+@@ -303036,10 +303037,11 @@
+ case ${prev}${p} in
+
+ -L* | -R* | -l*)
+- # Some compilers place space between "-{L,R}" and the path.
++ # Some compilers place space between "-{L,R,l}" and the path.
+ # Remove the space.
+ if test $p = "-L" ||
+- test $p = "-R"; then
++ test $p = "-R" ||
++ test $p = "-l"; then
+ prev=$p
+ continue
+ fi
diff --git a/var/spack/packages/openmpi/package.py b/var/spack/packages/openmpi/package.py
index 5e429dedf5..be2202fbbd 100644
--- a/var/spack/packages/openmpi/package.py
+++ b/var/spack/packages/openmpi/package.py
@@ -14,6 +14,8 @@ class Openmpi(Package):
homepage = "http://www.open-mpi.org"
+ version('1.10.1', 'f0fcd77ed345b7eafb431968124ba16e',
+ url = "http://www.open-mpi.org/software/ompi/v1.10/downloads/openmpi-1.10.1.tar.bz2")
version('1.10.0', '280cf952de68369cebaca886c5ce0304',
url = "http://www.open-mpi.org/software/ompi/v1.10/downloads/openmpi-1.10.0.tar.bz2")
version('1.8.8', '0dab8e602372da1425e9242ae37faf8c',
@@ -23,10 +25,15 @@ class Openmpi(Package):
patch('ad_lustre_rwcontig_open_source.patch', when="@1.6.5")
patch('llnl-platforms.patch', when="@1.6.5")
+ patch('configure.patch', when="@1.10.0:")
provides('mpi@:2.2', when='@1.6.5') # Open MPI 1.6.5 supports MPI-2.2
provides('mpi@:3.0', when='@1.8.8') # Open MPI 1.8.8 supports MPI-3.0
provides('mpi@:3.0', when='@1.10.0') # Open MPI 1.10.0 supports MPI-3.0
+ provides('mpi@:3.0', when='@1.10.1') # Open MPI 1.10.1 supports MPI-3.0
+
+
+ depends_on('hwloc')
def setup_dependent_environment(self, module, spec, dep_spec):
@@ -40,6 +47,8 @@ class Openmpi(Package):
def install(self, spec, prefix):
config_args = ["--prefix=%s" % prefix]
+ config_args.append("--with-hwloc=%s" % spec['hwloc'].prefix)
+
# TODO: use variants for this, e.g. +lanl, +llnl, etc.
# use this for LANL builds, but for LLNL builds, we need:
# "--with-platform=contrib/platform/llnl/optimized"
diff --git a/var/spack/packages/openssl/package.py b/var/spack/packages/openssl/package.py
index c5a8aeb9dc..4bf1f832d4 100644
--- a/var/spack/packages/openssl/package.py
+++ b/var/spack/packages/openssl/package.py
@@ -10,6 +10,7 @@ class Openssl(Package):
url = "http://www.openssl.org/source/openssl-1.0.1h.tar.gz"
version('1.0.1h', '8d6d684a9430d5cc98a62a5d8fbda8cf')
+ version('1.0.2d', '38dd619b2e77cbac69b99f52a053d25a')
depends_on("zlib")
parallel = False
diff --git a/var/spack/packages/papi/package.py b/var/spack/packages/papi/package.py
index 596f7114d6..097b8c41ec 100644
--- a/var/spack/packages/papi/package.py
+++ b/var/spack/packages/papi/package.py
@@ -13,6 +13,7 @@ class Papi(Package):
homepage = "http://icl.cs.utk.edu/papi/index.html"
url = "http://icl.cs.utk.edu/projects/papi/downloads/papi-5.3.0.tar.gz"
+ version('5.4.1', '9134a99219c79767a11463a76b0b01a2')
version('5.3.0', '367961dd0ab426e5ae367c2713924ffb')
def install(self, spec, prefix):
@@ -20,13 +21,10 @@ class Papi(Package):
configure_args=["--prefix=%s" % prefix]
- # need to force consistency in the use of compilers
- if spec.satisfies('%gcc'):
- configure_args.append('CC=gcc')
- configure_args.append('MPICH_CC=gcc')
- if spec.satisfies('%intel'):
- configure_args.append('CC=icc')
- configure_args.append('MPICH_CC=icc')
+ # PAPI uses MPI if MPI is present; since we don't require an
+ # MPI package, we ensure that all attempts to use MPI fail, so
+ # that PAPI does not get confused
+ configure_args.append('MPICC=:')
configure(*configure_args)
diff --git a/var/spack/packages/py-twisted/package.py b/var/spack/packages/py-twisted/package.py
new file mode 100644
index 0000000000..2fdebb6cb9
--- /dev/null
+++ b/var/spack/packages/py-twisted/package.py
@@ -0,0 +1,16 @@
+from spack import *
+
+class PyTwisted(Package):
+ """An asynchronous networking framework written in Python"""
+ homepage = "https://twistedmatrix.com/"
+ url = "https://pypi.python.org/packages/source/T/Twisted/Twisted-15.3.0.tar.bz2"
+
+ version('15.4.0', '5337ffb6aeeff3790981a2cd56db9655')
+ version('15.3.0', 'b58e83da2f00b3352afad74d0c5c4599')
+
+ depends_on('py-setuptools')
+
+ extends('python')
+
+ def install(self, spec, prefix):
+ python('setup.py', 'install', '--prefix=%s' % prefix)
diff --git a/var/spack/packages/rsync/package.py b/var/spack/packages/rsync/package.py
new file mode 100644
index 0000000000..8ae21b1cb9
--- /dev/null
+++ b/var/spack/packages/rsync/package.py
@@ -0,0 +1,14 @@
+from spack import *
+
+class Rsync(Package):
+ """rsync is an open source utility that provides fast incremental file transfer."""
+ homepage = "https://rsync.samba.org"
+ url = "https://download.samba.org/pub/rsync/rsync-3.1.1.tar.gz"
+
+ version('3.1.1', '43bd6676f0b404326eee2d63be3cdcfe')
+
+ def install(self, spec, prefix):
+ configure('--prefix=%s' % prefix)
+
+ make()
+ make("install")
generated by cgit v1.2.3-60-g2f50 (git 2.42.0) at 2024-07-05 17:28:08 +0000