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2017-05-09funhpc: Update to version 1.3 (#4170)Erik Schnetter1-3/+5
Also use a Spack-provided GoogleTest.
2017-05-09gdbm: Declare readline dependency (#4171)Erik Schnetter1-0/+2
2017-05-09Merge pull request #4165 from epfl-scitas/packages/cp2k_intel_stack_17Gregory Lee4-25/+82
cp2k: fixed compilation issues for intel stack
2017-05-09Travis version of pip is too old (#4180)Adam J. Stewart1-0/+2
* Travis version of pip is too old * Also need to upgrade setuptools
2017-05-09cp2k: fixed compilation issues for intel stackMassimiliano Culpo4-25/+82
Added DFLAGS to the `make.inc` file being written. These macros are also added to the language specific variables like CFLAGS, CXXFLAGS and FCFLAGS. Changed `spec.satisfies('foo')` with `'foo' in spec` in `intel-mkl`, see #4135. Added a basic build interface to `intel-mpi`.
2017-05-08Add GCC 7 (#4144)Adam J. Stewart4-52/+210
* Add GCC 7 * Allow users to build subset of GCC compilers with multi-value variant. * Add comment explaining what 'all' actually means * More specific golang support * Only require Zip when building Java * Comment out provide directives that don't currently work * Add Ada support * Use conflicts directive * Fix joining of languages * Need special flag to build jit * Explicitly declare GNAT download extension * Import tty, update lib64 to lib * BRIG and Go are not supported on macOS * Simplify formatting and imports * JIT patch required for newer versions as well
2017-05-08spec_syntax: added xfailing tests for cases in #4144 (#4151)Massimiliano Culpo1-0/+26
It seems that parse_anonymous_spec may fail if more than one part (variant, version range, etc.) is given to the function. Added tests to code against to fix the problem in #4144.
2017-05-08rework spack help (#3033)Todd Gamblin57-218/+736
- Full help is now only generated lazily, when needed. - Executing specific commands doesn't require loading all of them. - All commands are only loaded if we need them for help. - There is now short and long help: - short help (spack help) shows only basic spack options - long help (spack help -a) shows all spack options - Both divide help on commands into high-level sections - Commands now specify attributes from which help is auto-generated: - description: used in help to describe the command. - section: help section - level: short or long - Clean up command descriptions - Add a `spack docs` command to open full documentation in the browser. - move `spack doc` command to `spack pydoc` for clarity - Add a `spack --spec` command to show documentation on the spec syntax.
2017-05-08qt: add 5.8.0 which builds on Sierra with clang 8.1.0 (#4109)Denis Davydov3-2/+50
* qt: add 5.8.0 which builds on Sierra with clang 8.1.0 * enable parallel build, add freetype dependency * minor * minor
2017-05-08Merge pull request #4145 from scheibelp/features/temporary-no-python-for-libxcbscheibelp2-2/+4
Remove python dependency for libxcb and xcbproto
2017-05-07BarrierTimeoutError must derive from Exception (#4157)Massimiliano Culpo1-1/+1
Seen in https://travis-ci.org/LLNL/spack/builds/229484526, very likely due to a problem in the Travis builder.
2017-05-07Fix PGI compiler detection on PowerPC (#4150)Adam J. Stewart1-2/+10
2017-05-07Spec.__init__: removed dead code (#4146)Massimiliano Culpo1-5/+2
The conditionals are repeated in the statement before _add_dependencies
2017-05-07Paramiko python extensions + his deps and other related extensions (#4158)Luigi Calori7-0/+272
* adding paramiko and missing dependencies, setup to work with #2548 * adding other deps for paramiko * fix flake8 errors * removed spurious add * address suggestion for proper dependencies * fix cryptography deps * remove FIXME comments and commented depends lines
2017-05-07Added scala package (#67)nvarini1-0/+50
2017-05-06Add Read the Docs badge to README (#4153)Adam J. Stewart1-0/+1
2017-05-06gmp: switch to download directly from GNU (#4152)Adam J. Stewart1-1/+1
2017-05-06mpfr: switch to more reliable URL (#4139)Adam J. Stewart1-2/+3
* Add list_url to mpfr * Switch to download directly from GNU * http -> https
2017-05-06Updating bamtools to include a dependency for zlib. (#4031)Barry Britt1-8/+9
* Updating bamtools to include a dependency for zlib. In a standard compile, bamtools will fail if zlib headers are not installed on the target machine. In order to maintain compatibility with all systems -- and since zlib is included already as a dependency for cmake -- this patch adds zlib as a link dependency for the bamtools package. * Modified cmake rpath include. Bamtools has a non-standard library location, so we need to append $prefix/lib/bamtools to the rpath. Not sure there's a better way to do this... * Fixing syntax error in package.py Fixed a non-terminated parenthesis on line 46. * Updated bamtools to be a CMakePackage Removed extraneous code, and altered the package to extend cmake_args including the non-standard library location. * UpRemoving cmake dependency and removing blank line from end of file * Updates to cmake_args. Removed the duplicate definition of std_cmake_args in favor of simply overriding the CMAKE_INSTALL_RPATH variable that is provided. This should allow the package to be linked correctly to itself.
2017-05-06Update zlib to work with other compilers (#4088)Matthew Scott Krafczyk2-0/+15
* Fix -include issue with intel and pgi in zlib MERGE CANDIDATE * Patch zlib to compiler with the cray compiler suite.
2017-05-05Remind developers to update tab completion script (#4148)Adam J. Stewart1-0/+4
2017-05-05Add info for perl@5.22.1 (#4147)George Hartzell1-0/+1
What the user wants, the user gets....
2017-05-05Add latest version of curl (#4140)Adam J. Stewart1-1/+2
2017-05-05Python 3 doesn't have iteritems, use items (#4143)Adam J. Stewart3-5/+5
2017-05-05Add latest version of Lmod (#4141)Adam J. Stewart1-1/+2
2017-05-05Remove python dependency for libxcb and xcbprotoPeter Josef Scheibel2-2/+4
python+tk will not build because it depends (indirectly) on python~tk via libxcb. There are efforts to allow multiple instances of a package to concretize together but they are ongoing so in the meantime this comments out the dependencies and adds TODOs
2017-05-05Fix typos in Basic Installation Tutorial (#4127)Adam J. Stewart1-4/+4
2017-05-05Add info for jdk@8u73 (#4137)George Hartzell1-3/+6
* Fix ordering of versions (proper!) * Add url/digest for jdk@8u73
2017-05-05Add OpenCV 3.2.0 checksum (#4138)Todd Gamblin1-0/+1
2017-05-05Add info for r@3.3.3 (#4128)George Hartzell1-0/+1
2017-05-04SV variants are evaluated correctly in "when=" (#4118)Massimiliano Culpo5-42/+59
* SV variants are evaluated correctly in `when=` statements fixes #4113 The problem here was tricky: ```python spec.satisfies(other) ``` changes already the MV variants in others into SV variants (where necessary) if spec is concrete. If it is not concrete it does nothing because we may be acting at a pure syntactical level. When evaluating a `when=` keyword spec is for sure not concrete as it is in the middle of the concretization process. In this case we have to trigger manually the substitution in other to not end up comparing a MV variant "foo=bar" to a SV variant "foo=bar" and having False in return. Which is wrong. * sv variants: improved error message for typos in "when=" statements
2017-05-04variants: fixed packages reported by @adamjstewart in #4098 (#4105)Massimiliano Culpo5-33/+85
2017-05-04Merge pull request #4121 from davydden/fix_transitive_build_dep_2scheibelp1-3/+3
add transitive run dependencies of direct build dependencies
2017-05-04patch sqlite to work around macro definition (#4117)Gregory Lee2-0/+19
2017-05-04add transitive run dependencies of direct build dependenciesDenis Davydov1-3/+3
2017-05-03Merge pull request #4069 from davydden/fix_transitive_build_depscheibelp1-1/+6
only add direct build-only dependencies to PATH
2017-05-03Update py-beautifulsoup4 (#4089)Matthew Scott Krafczyk1-4/+3
* Update py-beautifulsoup4 * Change beautifulsoup4 url to pypi.io url.
2017-05-03Update cray compiler options (#4086)Matthew Scott Krafczyk1-0/+12
2017-05-03building wget depends on perl > 5.12.0 (#4087)Matthew Scott Krafczyk1-0/+1
* building wget depends on perl > 5.12.0 * Remove extra parenthesis
2017-05-03bash completion: fixed invalid identifier (#4079)Massimiliano Culpo1-1/+4
* bash completion: fixed `_spack_create-db-tarball': not a valid identifier * bash completion: dashes are translated to underscores This also fixes the name of the subfunction to be called, as apparently it was not updated after moving the command `create-db-tarball`.
2017-05-03hdf5: updated version (#4108)Massimiliano Culpo1-0/+1
2017-05-03spack: no stacktrace if not in debug mode + fix emacs variant (#4098)Massimiliano Culpo3-8/+11
* spack: no stacktrace if not in debug mode + fix emacs variant * emacs: removed dead code
2017-05-02Add the py-dryscrape package (#4094)Matthew Scott Krafczyk1-0/+41
* Add the py-dryscrape package * Adjust dependencies and change development to develop
2017-05-02Update the py-lxml package (#4090)Matthew Scott Krafczyk1-0/+4
2017-05-02Add findutils package (#4091)Matthew Scott Krafczyk1-0/+53
2017-05-02Add the py-webkit-server package (#4092)Matthew Scott Krafczyk1-0/+35
* Add the py-webkit-server package * Change development to develop
2017-05-02Add the py-xvfbwrapper package (#4093)Matthew Scott Krafczyk1-0/+37
2017-05-02Add py-pyprof2html package (#4095)Matthew Scott Krafczyk2-0/+49
2017-05-02Add py-libconf package (#4096)Matthew Scott Krafczyk1-0/+36
2017-05-02Add the libconfig package (#4097)Matthew Scott Krafczyk1-0/+43