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compiler (#32142)
* py-numpy: Change Fortran detect order for Fujitsu Compiler.
* create setup.cfg instead of command line.
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* [py-loguru] New package
* [py-loguru] Removed commented out line
* [py-loguru] Added types removed extra dependencies
* [py-loguru] missing windows dependency. listing windows as a conflict for now
* [py-loguru] depends on py-colorama when platform=windows
* [py-loguru] flake8
* [py-loguru] Import update
* [py-loguru]
- python is a runtime dependency
- setuptools is a build dependency
* [@spackbot] updating style on behalf of qwertos
Co-authored-by: James A Zilberman <jazrc@rit.edu>
Co-authored-by: qwertos <qwertos@users.noreply.github.com>
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* [py-python-javabridge] New package
* [py-python-javabridge] Added dependencies
* [py-python-javabridge] Added types
* [py-python-javabridge] py-setuptools and java are dependencies
* [py-python-javabridge] Import update
* [@spackbot] updating style on behalf of qwertos
Co-authored-by: James A Zilberman <jazrc@rit.edu>
Co-authored-by: qwertos <qwertos@users.noreply.github.com>
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* libfabric: add new versions
1.15.0, 1.15.1, main (previously named master)
* Add OPX fabric option, with conflict for versions before v1.15.0
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
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Taken from CMakePackage
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* geant4: use define function
* geant4: Change new feature from conflicts to when
* geant4: add support/conflicts for nvhpc
* fixup! geant4: add support/conflicts for nvhpc
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gfortran can make it with O3, it might be better to remove this limitation.
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Co-authored-by: Hadrien G. <knights_of_ni@gmx.com>
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This support requires adding the '--tests' option to 'spack ci rebuild'.
Packages whose stand-alone tests are broken (in the CI environment) can
be configured in gitlab-ci to be skipped by adding them to
broken-tests-packages.
Highlights include:
- Restructured 'spack ci' help to provide better subcommand summaries;
- Ensured only one InstallError (i.e., installer's) rather than allowing
build_environment to have its own; and
- Refactored CI and CDash reporting to keep CDash-related properties and
behavior in a separate class.
This allows stand-alone tests from `spack ci` to run when the `--tests`
option is used. With `--tests`, stand-alone tests are run **after** a
**successful** (re)build of the package. Test results are collected
and report(able) using CDash.
This PR adds the following features:
- Adds `-t` and `--tests` to `spack ci rebuild` to run stand-alone tests;
- Adds `--fail-fast` to stop stand-alone tests after the first failure;
- Ensures a *single* `InstallError` across packages
(i.e., removes second class from build environment);
- Captures skipping tests for externals and uninstalled packages
(for CDash reporting);
- Copies test logs and outputs to the CI artifacts directory to facilitate
debugging;
- Parses stand-alone test results to report outputs from each `run_test` as
separate test parts (CDash reporting);
- Logs a test completion message to allow capture of timing of the last
`run_test` part;
- Adds the runner description to the CDash site to better distinguish entries
in CDash tables;
- Adds `gitlab-ci` `broken-tests-packages` to CI configuration to skip
stand-alone testing for packages with known issues;
- Changes `spack ci --help` so description of each subcommand is a single line;
- Changes `spack ci <subcommand> --help` to provide the full description of
each command (versus no description); and
- Ensures `junit` test log file ends in an `.xml` extension (versus default where
it does not).
Tasks:
- [x] Include the equivalent of the architecture information, or at least the host target, in the CDash output
- [x] Upload stand-alone test results files as `test` artifacts
- [x] Confirm tests are run in GitLab
- [x] Ensure CDash results are uploaded as artifacts
- [x] Resolve issues with CDash build-and test results appearing on same row of the table
- [x] Add unit tests as needed
- [x] Investigate why some (dependency) packages don't have test results (e.g., related from other pipelines)
- [x] Ensure proper parsing and reporting of skipped tests (as `not run`) .. post- #28701 merge
- [x] Restore the proper CDash URLand or mirror ONCE out-of-band testing completed
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Co-authored-by: Daryl W. Grunau <dwg@lanl.gov>
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Co-authored-by: github-actions <github-actions@users.noreply.github.com>
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parallelio) (#32222)
* Update ESMF package from JCSDA/NOAA-EMC spack fork
* Update var/spack/repos/builtin/packages/esmf/package.py
Fix url_for_version
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
* [@spackbot] updating style on behalf of climbfuji
Co-authored-by: Jim Edwards <jedwards@ucar.edu>
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
Co-authored-by: climbfuji <climbfuji@users.noreply.github.com>
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* gaudi: consistent test dependencies when +examples
Gaudi requires testing to be enabled for examples to be built, so all
test dependencies are also there for `+examples`. This PR fixes a
missing pytest dependency when `+examples` is used but no testing is
enabled. The construct with the loop is to ensure the identical
dependencies are always used, even as version ranges my start to differ.
Testing with gaudi_add_tests was added in v35r0. Some nosetests and
QMtests were in the tree before, but not accessible it seems. The
effective dependency since 35.0 is also applied for pytest, extending
the range that was there before disentangling `optional`, at
https://github.com/spack/spack/blob/9d67d1e0346203a20b7ba44940061da855d405ca/var/spack/repos/builtin/packages/gaudi/package.py
* gaudi: version 36.7 in other PR...
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Flags to configure were erroneously managed to configure twice.
Removed the one that was wrong so that a configure warning is no longer issued.
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The "release" tarball provided by github lacks several files in
the SFconv/expat/xmlparse directory, including xmlparse. Using
tarballs based off of version tags solves the problem.
o Changes version() to use commits associated with version tags.
o Adds several additional versions.
o Adds myself as maintainer.
o Adds hook to execute autogen.sh.
o Adds autotools &ct dependences.
o Removes expat dependence.
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* openmc: add v0.13.1
* Add @paulromano as maintainer of openmc and py-openmc
* Address review comments from @adamjstewart
* Add back MPI variant in openmc package
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* helics: update v3 options and add missing versions
* helics: allow using openssl 3.x for encryption support
* helics: fix style errors
* helics: Apply suggestion from code review
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
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Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
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Discovered this missing conflict when building the e4s enviroment with
unify:when_possible. #31940
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* enable geopm oneapi
* enable packages that depend on py-numpy
* disable nan warnings
* undo geopm enable
* undo geopm, it has multiple compile issues
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In a fast-moving project with as many forks as LLVM, it's difficult to
accurately determine if a function exists just by checking the version
number. The existing version check fails, for example, with llvm-amdgpu
from ROCm 4.5. It is more robust to directly check if the function
exists.
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Added the SHA256 for version 6.3.2 and added logic to eal with the change of naming pattern for the makefile.include files that now appears to leave out the "linux_" prefix. (Changes should be. backwards compatible.)
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
Co-authored-by: alansill <alansill@users.noreply.github.com>
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