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2021-06-08mypy: add types-six to the list of installed packages (#24207)Massimiliano Culpo1-1/+1
See https://mypy-lang.blogspot.com/2021/05/the-upcoming-switch-to-modular-typeshed.html for a broader explanation.
2021-06-08Pipelines: Fix default generated rebuild job script (#24185)Scott Wittenburg1-2/+1
2021-06-08singularity: add singularityce fork (#24201)Vanessasaurus3-139/+182
Since the two packages share a common history, the installation procedure has been factored into a common base class. Signed-off-by: vsoch <vsoch@users.noreply.github.com>
2021-06-08[umpire] Fix missing header (#24198)Teodor Nikolov2-0/+13
2021-06-08Python: fix +tkinter+tix support (#23980)Adam J. Stewart5-79/+203
* Tcl: fix TCLLIBPATH * Fix TCL|TK|TIX_LIBRARY paths * Fix TCL_LIBRARY, no tcl8.6 subdir * Don't rely on os.listdirs sorting For tcl and tk, we also install the source directory, so there are two init.tcl and tk.tcl locations. We want the one in lib/lib64, which should come before the one in share. * Add more patches * Fix dylib on macOS * Tk: add smoke tests * Tix: add smoke test
2021-06-08ASP-based solver: permit to use virtual specs in environments (#24199)Massimiliano Culpo4-17/+50
Extracting specs for the result of a solve has been factored as a method into the asp.Result class. The method account for virtual specs being passed as initial requests.
2021-06-08ASP-based solver: reordered low priority optimization criteria (#24184)Massimiliano Culpo5-16/+53
Minimizing compiler mismatches in the DAG and preferring newer versions of packages are now higher priority than trying to use as many default values as possible in multi-valued variants.
2021-06-08osu-micro-benchmarks: new version 5.7.1 (#23590)Robert Mijakovic1-0/+6
2021-06-08macOS: add monterey as macOS version 12. (#24192)Todd Gamblin1-1/+2
2021-06-08Update stand-alone tests to use test stage work directory; also added ↵Tamara Dahlgren1-14/+25
expected ctest output (#24191)
2021-06-08gatk: make r a variant (#24189)Glenn Johnson1-1/+12
According to the docs, r is needed for plotting, but plotting is untested. In addition, the specific version requirement of java for gatk could lead to multiple installations of r being triggered in an environment. That might cause people to have to be deliberate about java in a deployment. All in all, it seems that r is better as a variant for gatk.
2021-06-08Changes for ufl and basix (#24187)Chris Richardson2-2/+2
2021-06-08biobambam2: update stand-alone tests to use test stage work directory (#24111)Tamara Dahlgren1-1/+4
2021-06-07Fix brittle unit-tests on providers (#24186)Massimiliano Culpo1-2/+0
These tests were broken by #24176
2021-06-07build_systems: Make autotools builds verbose (#24161)Michael Kuhn1-1/+4
This is also what our other build systems are doing.
2021-06-07pkgconf: disable check due to missing dependencies (#24168)Valentin Volkl1-0/+6
2021-06-07Docs: fix missing backtick in Environments docs (#24109)Adam J. Stewart1-1/+1
2021-06-07delphes: add v3.5.0 (#24101)Valentin Volkl1-3/+2
2021-06-07Update stand-alone tests to use test stage work directory (#24110)Tamara Dahlgren1-20/+29
2021-06-07mpich: fix constraints in provides directives (#24176)Harmen Stoppels1-3/+5
2021-06-07netdata: add v1.31.0 (#24158)Michael Kuhn1-0/+11
This also adds some missing dependencies for core functionality.
2021-06-07r-rpostgres: add new package (#22442)Glenn Johnson1-0/+30
2021-06-07r-rmariadb: remove no longer needed patch (#24171)Glenn Johnson2-15/+2
Since PR #22873 was merged, the configure patch for r-rmariadb is no longer needed. Also added comment regarding configure arguments.
2021-06-07Add int64 back for hypre in nalu-wind (#24140)psakievich1-2/+2
To concretize the entire exawind environment together we need `hypre` to be built with the same flags for `nalu-wind` and `amr-wind`. @jrood-nrel
2021-06-07axl: Don't deprecate v0.3.0 as it's still actively required by veloc (#24179)Chuck Atkins1-1/+1
2021-06-07AMD ROCm release 4.2.0: bump up mivisionx version and add gtk option to ↵arjun-raj-kuppala1-8/+16
opencv (#23881) Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2021-06-07Revert "Bootstrap with -O3 in cmake (#23147)" (#24174)Harmen Stoppels1-2/+0
This reverts commit fef05621a77ee8b62b318370e1ec7bf39502eb7c.
2021-06-06arborx: enable trilinos 13+ (#24153)Luca Heltai1-2/+1
2021-06-06py-radiant-mlhub: add new package (#24167)Adam J. Stewart1-0/+24
2021-06-06NCCL: add new versions (#24155)Adam J. Stewart1-2/+4
2021-06-06axom: don't require hdf5~shared (#24144)Peter Scheibel1-1/+1
2021-06-06dealii: add support for arborx (#24154)Luca Heltai1-2/+6
2021-06-06darshan-runtime: add SGE scheduler (#24160)Glenn Johnson1-3/+9
* Set job_id for SGE in darshan-runtime package * Use a multi value variant for scheduler Only one scheduler can be selected so make the variant multi valued and set multi=False.
2021-06-06py-pystac: add new package (#24166)Adam J. Stewart1-0/+18
2021-06-06py-tqdm: add version 4.56.2 (#24165)Adam J. Stewart1-0/+1
2021-06-06Add Go 1.16.5 and 1.15.13 (#24170)Paul1-0/+2
2021-06-05veloc: The axl dependency had an API change in 0.4.0 that breaks veloc (#24157)Chuck Atkins1-1/+1
2021-06-05GMT: add v6.2.0 (#24164)Adam J. Stewart1-0/+2
2021-06-05Fix git_version on macOS (#24163)Adam J. Stewart1-2/+3
2021-06-05hdf-eos5: Fix issue when linking against hdf5+szip (#23411) (#23412)Tom Payerle1-1/+6
* hdf-eos5: Fix issue when linking against hdf5+szip (#23411) Should fix issue #23411 when linking against hdf5+szip Also fix bug if hdf5 does not depend on zlib Reluctantly added payerle as a maintainer
2021-06-04apply default linux prefix inspections to all module sets (#24151)Greg Becker1-6/+5
2021-06-04py-warpx: 21.06 (#24152)Axel Huebl3-3/+8
2021-06-04[py-cvxpy]: Add new version, fix depends_on versions (#24147)Tom Payerle1-2/+7
Added version 1.1.13 Fixed versions for dependencies based on README.md for package In particular: * versions 1.1.x require python@3, at least 3.4 and for 1.1.13 at least 3.6 * py-osqp had been pinned to version 0.4.1, but README.md either shows no version restriction, of 0.4.1 and higher * @1.1.13 requires at least 1.1.6 of py-scs * I am assuming since 1.1.x is python@3 only, py-six no longer required (it was not explicitly showing up in README.md for these versions)
2021-06-04tk: fix url for patch (#24146)Manuela Kuhn1-1/+1
2021-06-04main, modules: fix module roots not being found (#24135)Michael Kuhn2-10/+5
Since the module roots were removed from the config file, `--print-shell-vars` cannot find the module roots anymore. Fix it by using the new `root_path` function. Moreover, the roots for lmod and modules seems to have been flipped by accident.
2021-06-04New package: py-python3-xlib (#24139)Jen Herting1-0/+16
* [py-python3-xlib] created template * [py-python3-xlib] requires python3 * [py-python3-xlib] Final cleanup - added homepage - added description - removed fixmes * [py-python3-xlib] added homepage * [py-python3-xlib] removing homepage entirely
2021-06-04libceed: Update the hip-related variant (#24142)Tamara Dahlgren1-1/+1
2021-06-04enable std c++14 (#24127)Joe Heaton1-0/+6
2021-06-04opencv: Adding gtk variant (#23937)arjun-raj-kuppala1-1/+5
2021-06-04py-pyprecice: Add version 2.2.0.2 and 2.2.1.1 (#24138)ajaust1-1/+4
* add versions 2.2.0.2 and 2.2.1.1 * Add maintainer Added Ishaan as additional maintainer as he is also maintainer of the Python bindings * add new major precice version as dependency