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2021-03-09kicad: add v5.1.9 (#22123)Andrew W Elble2-4/+12
ngspice to v34
2021-03-09iptraf-ng: new package at v1.2.1 (#22155)darmac1-0/+22
2021-03-09hw-probe: new package at v1.5 (#22156)darmac1-0/+20
2021-03-09ike-scan: new package at v1.9 (#22160)darmac1-0/+15
2021-03-09libmacaroons: new package at v0.3.0 (#22142)darmac1-0/+26
2021-03-08scr: require dtcmp, switch from /tmp to /dev/shm (#22073)Adam Moody1-4/+16
2021-03-08DSQSS: Add test function, and Continuation of # 21666. (#22103)a-saitoh-fj2-0/+55
2021-03-08Fix `spack graph` when deptypes are filtered (#22121)Harmen Stoppels6-8/+84
2021-03-08Add `--vanilla` flag to r build system (#22166)Glenn Johnson1-0/+1
Unlike the other commands of the `R CMD` interface, the `INSTALL` command will read `Renviron` files. This can potentially break builds of r- packages, depending on what is set in the `Renviron` file. This PR adds the `--vanilla` flag to ensure that neither `Rprofile` nor `Renviron` files are read during Spack builds of r- packages.
2021-03-08casacore: add v3.4.0 (#22163)Martin Pokorny1-0/+1
2021-03-08Update Cmake 3.19.x to support crayftn preprocessing (cce 11+) (#22122)James Elliott2-0/+38
Cray added necessary functionality for CMake to support fortran preprocessing using crayftn. This patch is necessary for the current release of cmake (3.19), with this patched expected to be in the 3.20 release of Cmake. The included patch is from kitware. see https://gitlab.kitware.com/cmake/cmake/-/merge_requests/5882 Co-authored-by: James Elliott <jjellio@sandia.govv>
2021-03-08v0.9.1 release of mochi-margo (#22164)Phil Carns2-3/+5
2021-03-08Add latest versions for lcio and sio (#22173)Thomas Madlener2-1/+3
2021-03-08Tuning variant for Kokkos packages (#22176)David Poliakoff1-0/+2
2021-03-08py-tensorflow-probability: run install from correct working dir (#22175)Andrew W Elble1-3/+6
2021-03-08suite-sparse: add v5.9.0 (#22168)Kai Torben Ohlhus1-0/+1
Update homepage URL and see release notes: - https://github.com/DrTimothyAldenDavis/SuiteSparse/releases/tag/v5.9.0
2021-03-08kmod: add --with-bashcompletiondir option (#22167)Tomoyasu Nojiri1-0/+6
2021-03-08catch2: add v2.13.4 (#22170)Axel Huebl1-1/+2
Add the latest release of Catch2.
2021-03-08bpp-seq: add v2.4.1 (#22171)Tomoyasu Nojiri1-0/+1
2021-03-08bpp-core: add v2.4.1 (#22172)Tomoyasu Nojiri1-0/+1
2021-03-08py-tensorflow-probability: new package (#22165)Andrew W Elble3-0/+141
* py-tensorflow-probability: new package * setuptools dep, quoting syntax
2021-03-07spack python: add --path option (#22006)Todd Gamblin3-1/+14
This adds a `--path` option to `spack python` that shows the `python` interpreter that Spack is using. e.g.: ```console $ spack python --path /Users/gamblin2/src/spack/var/spack/environments/default/.spack-env/view/bin/python ``` This is useful for debugging, and we can ask users to run it to understand what python Spack is picking up via preferences in `bin/spack` and via the `SPACK_PYTHON` environment variable introduced in #21222.
2021-03-07add `spack test list --all` (#22032)Todd Gamblin3-6/+39
`spack test list` will show you which *installed* packages can be tested but it won't show you which packages have tests. - [x] add `spack test list --all` to show which packages have test methods - [x] update `has_test_method()` to handle package instances *and* package classes.
2021-03-06Add new package: r-mockery (#22125)darmac1-0/+25
2021-03-06Add new package: r-lobstr (#22069)darmac1-0/+25
2021-03-05libabigail: new package (#22092)Vanessasaurus1-0/+25
* adding package for libabigail, which we likely will need to use it for an analysis! * includes variant for documentation (doxygen and pysphinx are associated dependencies)
2021-03-05Improve R package creation (#21861)Glenn Johnson3-6/+125
* Improve R package creation This PR adds the `list_url` attribute to CRAN R packages when using `spack create`. It also adds the `git` attribute to R Bioconductor packages upon creation. * Switch over to using cran/bioc attributes The cran/bioc entries are set to have the '=' line up with homepage entry, but homepage does not need to exist in the package file. If it does not, that could affect the alignment. * Do not have to split bioc * Edit R package documentation Explain Bioconductor packages and add `cran` and `bioc` attributes. * Update lib/spack/docs/build_systems/rpackage.rst Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update lib/spack/docs/build_systems/rpackage.rst Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Simplify the cran attribute The version can be faked so that the cran attribute is simply equal to the CRAN package name. * Edit the docs to reflect new `cran` attribute format * Use the first element of self.versions() for url Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-03-05gtkplus: add new version, convert to meson (#21914)Adam J. Stewart1-27/+69
* gtkplus: add new version, convert to meson * Add suggestions from aweits
2021-03-05Added support for disabling mumps in ipopt (#21592)Asher Mancinelli1-9/+16
2021-03-05casacore: use a modern CMake's version of FindHDF5.cmake (#21882)Martin Pokorny1-0/+7
Remove casacore's old version of the file with a package patch() function, and depend on a modern CMake for the build. Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-03-05syscalc: fix recipe and URL (extension) (#22112)iarspider1-3/+9
2021-03-05Add Caliper 2.5.0 and Adiak 0.3.0 (#20718)David Böhme2-20/+44
2021-03-05FEniCS: update of packages to support 2019.1.0 (#21207)emai-imcs3-119/+173
2021-03-05reframe: add v3.4.2 and v3.4.1, enable autocompletion (#22114)Vasileios Karakasis1-16/+22
2021-03-05py-oppy: add v0_1_5 (#22061)Mathew Cleveland1-1/+1
Co-authored-by: Cleveland <cleveland@lanl.gov>
2021-03-05tfel: add v3.3.1, fix typo in checksum of v3.4.0 (#22062)thelfer1-1/+2
2021-03-05pythia6: extra patch provided by CERN's EP-SFT (#22055)iarspider3-0/+22
2021-03-05mcl: fixing missing extern in global variables (#22094)snehring1-0/+5
Revealed by GCC 10 see https://gcc.gnu.org/gcc-10/porting_to.html
2021-03-05rtags: add v2.20 (#22068)darmac1-0/+1
2021-03-05dd4hep: add v0.16 and geant4units variant (#22064)Valentin Volkl1-0/+3
2021-03-05hpcviewer: add version 2021.03 (#22107)Mark W. Krentel1-0/+3
2021-03-05xfsprogs: add --with-systemd-unit-dir option (#22075)Tomoyasu Nojiri1-1/+3
2021-03-05freeipmi: add --with-systemdsystemunitdir option (#22096)Tomoyasu Nojiri1-1/+3
2021-03-05keepalived: add --with-systemdsystemunitdir option (#22098)Tomoyasu Nojiri1-0/+5
2021-03-05moosefs: add --with-systemdsystemunitdir option (#22099)Tomoyasu Nojiri1-0/+5
2021-03-05rrdtool: add --with-systemdsystemunitdir option (#22100)Tomoyasu Nojiri1-1/+3
2021-03-05py-torch: add v1.8.0 (#22101)Adam J. Stewart1-3/+5
2021-03-05py-torchvision: add v0.9.0 (#22102)Adam J. Stewart1-4/+6
2021-03-05SLATE: Default ~cuda (#22110)Axel Huebl1-1/+1
Same as BLAS++ since more GPU backends are coming and cuda is usually off as a variant default in Spack, unless requested.
2021-03-05py-python-ldap: add link dependency on cyrus-sasl (#22105)Tomoyasu Nojiri1-0/+1
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