spack - A flexible package manager that supports multiple versions, configurations, platforms, and compilers.

Age	Commit message (Collapse)	Author	Files	Lines
2017-11-03	r-yapsa: created new package (#6121)	Yifan Zhu	1	-0/+57

2017-11-03	r-keggrest: created new package (#6120)	Yifan Zhu	1	-0/+44

2017-11-03	r-statmod: Create new package. (#6119)	lingnanyuan	1	-0/+42

2017-11-03	r-deseq: Create new package. (#6118)	lingnanyuan	1	-0/+46

2017-11-03	r-samr: Create new package. (#6117)	lingnanyuan	1	-0/+37

2017-11-03	r-impute: Create new package. (#6116)	lingnanyuan	1	-0/+36

2017-11-03	r-altcdfenvs: Create new package. (#6115)	lingnanyuan	1	-0/+43

2017-11-03	r-makecdfenv: Create new package. (#6114)	lingnanyuan	1	-0/+44

2017-11-03	r-hypergraph: Create new package. (#6113)	lingnanyuan	1	-0/+38

2017-11-03	Fix restaging of resources (#5681)	Johann Klähn	1	-12/+22
	Part of the resource staging process is to place downloaded/expanded files in the root stage. This was not happening when a resource stage was restaged.
2017-11-03	spack fetch: don't fetch externals. (#6124)	Todd Gamblin	1	-1/+8
	Fixes #6123 spack fetch shouldn't attempt to fetch external deps when invoked with --dependencies.
2017-11-03	ISAAC 1.3.2 (#6129)	Axel Huebl	2	-3/+6
	Add a new release of ISAAC.
2017-11-02	Configure user for mock Git repository (#6128)	Michael Kuhn	1	-0/+2
	If user.useConfigOnly is set globally and no name or e-mail is configured, the git_fetch tests fail.
2017-11-02	test_activations: also test perl activations	Ben Boeckel	1	-0/+103

2017-11-02	test_activations: test Python's extension logic	Peter Scheibel	1	-0/+168

2017-11-02	spec: support a test prefix	Peter Scheibel	1	-0/+5
	This is used in tests to test real packages without actually building and installing them.
2017-11-02	aspell: refuse to work with non-global extensions	Ben Boeckel	1	-1/+13
	Aspell compiles in the paths it looks for rather than looking relative to its binary location. There are also no environment variables to redirect it other than changing the path to the configuration file it looks at.
2017-11-02	perl: support extensions in views	Ben Boeckel	1	-2/+8

2017-11-02	python: extensions support for easy-install.pth	Oliver Breitwieser	1	-10/+30

2017-11-02	view: test conflicting packages in views	Ben Boeckel	3	-4/+29

2017-11-02	view: test that extension paths exist	Ben Boeckel	3	-0/+29

2017-11-02	filesystem_view: reject packages with activations	Ben Boeckel	3	-11/+26
	If there are extensions that are globally activated, reject adding them to a view. Those extensions should not be implicitly activated.
2017-11-02	view: test viewing external packages	Ben Boeckel	1	-0/+9

2017-11-02	view: add a test for extension activation	Ben Boeckel	1	-0/+82

2017-11-02	extension1: add a second version	Ben Boeckel	1	-0/+1

2017-11-02	extensions: support only showing a subset of information	Ben Boeckel	1	-32/+60

2017-11-02	extensions: support acting on a view	Ben Boeckel	3	-12/+40
	This allows extensions to be (de)activated and queried within a view rather than only acting on the global installation.
2017-11-02	view: use the FilesystemView abstraction for creating views	Oliver Breitwieser	1	-198/+127

2017-11-02	view: fix some docstrings for arguments	Oliver Breitwieser	1	-2/+2

2017-11-02	filesystem_view: do not link external packages	Ben Boeckel	1	-0/+10

2017-11-02	filesystem_view: add a class to handle a view via a Yaml description	Oliver Breitwieser	1	-0/+524

2017-11-02	package: support removing dependencies when deactivating	Oliver Breitwieser	1	-6/+14

2017-11-02	conftest: mock out spack.store.extensions as well	Ben Boeckel	1	-0/+4

2017-11-02	views: support querying view layouts as well	Oliver Breitwieser	5	-26/+56
	This abstracts out the layout in use between the global installations and a specific view.
2017-11-02	link_tree: support choosing the link function	Oliver Breitwieser	1	-2/+2
	This can be used to make hardlinks rather than symlinks.
2017-11-02	link_tree: support ignoring conflicts	Oliver Breitwieser	1	-3/+16

2017-11-02	directory_layout: add a YamlExtensionsLayout class	Oliver Breitwieser	1	-0/+25
	This uses a view to query extensions.
2017-11-02	link_tree: only remove matching files when unmerging	Oliver Breitwieser	1	-1/+6

2017-11-02	directory_layout: factor out an ExtensionsLayout class	Oliver Breitwieser	1	-92/+118

2017-11-02	extensions: add an installed_extensions_for method	Ben Boeckel	2	-1/+11

2017-11-02	database: rename `installed_extensions_for`	Oliver Breitwieser	3	-3/+3
	Views support activating packages, so rename the method because it will soon query what is activated versus what is installed.
2017-11-02	package: support verbosity when activating	Oliver Breitwieser	1	-8/+14

2017-11-02	package: rename `activated` to `is_activated`	Oliver Breitwieser	4	-10/+10
	This allows the activation code to be later given parameters.
2017-11-02	cmd/test: fix a typo in a comment	Ben Boeckel	1	-1/+1

2017-11-02	spec_yaml: fix a typo	Ben Boeckel	1	-1/+1

2017-11-02	view: fix a typo	Oliver Breitwieser	1	-1/+1

2017-11-02	determine full compiler version for gcc-7	Ben Boeckel	1	-1/+4
	Fixes #5778. Spack uses 'gcc -dumpversion' to determine the full version of gcc. 'gcc -dumpversion' no longer gives the full version on gcc 7.2.0. 'gcc -dumpfullversion' is required instead. This PR detects when 'gcc -dumpversion' gives a truncated version of '7' and in that case retrieves the full version with 'gcc -dumpfullversion'
2017-11-02	bdftopcf: require xproto and fontsproto at build time (#6112)	Ben Boeckel	1	-0/+2
	These are technically "link" depends of libxfont, but they have no actual libraries. Fixes #5936.
2017-11-02	Add package r-reportingtools and update url for its dependencies. (#6071)	lingnanyuan	4	-5/+71
	* r-reportingtools: Create new package. * r-go-db: Update url. * r-gseabase: Update url. * r-pfam-db: Update url.
2017-11-02	adios: Fix hdf5 and sz dependencies (#6016)	Michael Kuhn	1	-2/+2
	- hdf5's +hl variant is required because the build uses libhdf5_hl. - sz is only compatible up to version 1.4.10 because the library has been renamed to libSZ in 1.4.11.