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2019-05-16flake8: add exceptions for overly pedantic camelcase rules from pep8-naming ↵Todd Gamblin2-2/+4
(#11477) Rules N813 and N814 prevented import statements like this: xml.etree.ElementTree as et xml.etree.ElementTree as ET But both of those seem pretty reasonable. We see no reason to require any camelcase import to be imported "as" a camelcase word.
2019-05-15Update flecsi package.py (#11442)ktsai71-5/+14
* Update flecsi package.py * Update package.py * Update package.py * Update package.py
2019-05-15r-geonames: new package at 0.999 (#11455)Justin S1-0/+19
2019-05-15repeatscout: new package at 1.0.5 (#11409)Justin S1-0/+24
* repeatscout: new package at 1.0.5 * repeatscout: add trf runtime dependency * repeatscout: add nseg runtime dependency
2019-05-15r-phylostratr: new package (#11053)Justin S1-0/+34
2019-05-15r-taxizedb: new package at 0.1.4 (#11052)Justin S1-0/+28
2019-05-15r-rmysql: add 0.10.17, mariadb-connector-c dependency (#11044)Justin S1-2/+3
* r-rmysql: add 0.10.17, mariadb-connector-c dependency * r-rmysql: add dbi, mariadb version constraints
2019-05-15recon: new package at 1.08 (#11408)Justin S2-0/+635
* recon: new package at 1.08 * recon: add period * recon: use proper decorators, better documentation * recon: fix incorrect os import * recon: add repeatmasker patch as variant
2019-05-15r-rnoaa: new package at 0.8.4 (#11461)Justin S1-0/+32
2019-05-15r-isdparser: new package at 0.3.0 (#11460)Justin S1-0/+19
2019-05-15r-crul: new package at 0.7.4 (#11459)Justin S1-0/+22
2019-05-15r-httpcode: new package at 0.2.0 (#11454)Justin S1-0/+16
2019-05-15r-urltools: new package at 1.7.3 (#11458)Justin S1-0/+20
2019-05-15r-triebeard: new package at 0.3.0 (#11457)Justin S1-0/+18
2019-05-15r-curl: add 3.3 (#11456)Justin S1-0/+1
2019-05-15fix suite-sparse built with tbb from intel-parallel-studio (#11134)Denis Davydov2-2/+12
* fix suite-sparse built with tbb from intel-parallel-studio * intel: add tbb_headers, strip newline from cxx_lib * use property
2019-05-15New package: NSEG (starting at version 1.0) (#11410)Justin S1-0/+81
The source is managed as a set of files in an FTP URL. Since there are no FetchStrategy's implemented for this setup, the files are managed as a set of Resource's
2019-05-15CMake package: add dependencies (#11257)Leonhard Reichenbach3-1/+29
Add dependencies to CMake and GnuTLS which would otherwise be picked up from the system * Add gnutls as explicit dependency of CMake * Add new package libidn2 as explicit dependency for gnutls
2019-05-15parsplice: fix build (#11462)Christoph Junghans1-2/+2
2019-05-15Use `svn info --xml` instead of `svn info` to get svn revisions (#11466)Todd Gamblin2-14/+8
- `svn info` prints different results depending on the system locale - in particular, Japanese output doesn't contain "Revision:" - Change Spack code to use XML output instead of using the human output
2019-05-15Added setuptools to receipe (#11463)Brian Van Essen1-0/+1
2019-05-15kitty: Fix pkgconfig dependency (#11465)Michael Kuhn1-1/+1
pkgconfig is the correct virtual dependency while pkg-config is a specific implementation.
2019-05-15New package: py-pyrosar (#11428)Sinan1-0/+27
2019-05-15New package: py-spatialist (#11427)Sinan1-0/+27
2019-05-15New package: py-tblib (#11425)Sinan1-0/+18
2019-05-15New package: py-scoop (#11423)Sinan1-0/+22
2019-05-15New package: py-progressbar2 (#11421)Sinan1-0/+20
2019-05-15New package: py-python-utils (#11422)Sinan1-0/+19
2019-05-14nut: add v0.1.1 (#11444)Christoph Junghans1-2/+3
2019-05-14r-construct: new package at 1.0.3 (#11452)Justin S1-0/+29
2019-05-14r-rstan: add 2.18.2 (#11447)Justin S1-0/+7
2019-05-14r-loo: new package at 2.1.0 (#11448)Justin S1-0/+21
2019-05-15LBANN: add support for new python front end (#11395)Brian Van Essen12-17/+177
* LBANN: add python dependency and required python library dependencies * LBANN: add version 0.99 as alias for develop branch * LBANN: build Conduit library by default * LBANN: CUB is included with Hydrogen for later versions * New package: py-graphviz (dependency for LBANN) * New package: py-texttable (dependency for LBANN) * New package: py-onnx (dependency for LBANN) * New package: py-typing-extensions (dependency for py-onnx) * Conduit: add version 0.4.0 * NCCL: Add versions 2.4.6-1 and 2.4.2-1 * Protobuf: Add versions 3.7.1 and 3.7.0 * py-protobuf: add version 3.7.1 * py-typing: add version 3.6.4 * cuDNN: add versions. The source differs depending on the architecture, so the versions include a suffix to encode this. For example this adds 7.5.1-10.1-x86_64 as well as 7.5.1-10.1-ppc64le * cuDNN: Newer versions require newer versions of CUDA * Hydrogen: add configure options for CUB and Aluminum
2019-05-14gmap-gsnap: add 2019-05-12 (#11453)Justin S1-0/+1
2019-05-14r-rstantools: new package at 1.5.1 (#11451)Justin S1-0/+16
2019-05-14r-caroline: new package at 0.7.6 (#11450)Justin S1-0/+19
2019-05-14r-stanheaders: add 2.18.1 (#11446)Justin S1-0/+1
2019-05-14r-withr: add 2.1.2 (#11445)Justin S1-0/+1
2019-05-14repeatmasker: add 4.0.9, refactor interactive config (#11385)Justin S1-10/+23
2019-05-15PNetCDF package: enable option required by NetCDF (#11420)Jon Rood1-0/+3
The --enable-relax-coord-bound option was added in 1.8.0. NetCDF 4.6.3 enabled relax coords by default and required it from PNetCDF. PNetCDF 1.10.0 enabled it by default but for versions between 1.8.0 and 1.10.0 it should be enabled explicitly.
2019-05-15CUDA package: exclude compat libs (#11449)Peter Scheibel1-0/+21
CUDA 10.0 provides Compatability libraries for running newer versions of CUDA with older drivers. These do not work with newer drivers.
2019-05-14megadock: new package at 4.0.3 (#10537)Justin S1-0/+77
* megadock: new package at 4.0.3 * megadock: remove CudaPackage redundancies * megadock: move env vars to build targets, use cuda_arch variant * megadock: flake8 fixes, more flexible mathlib
2019-05-15Fix py-yt for Python 2 by requesting older py-ipython version (#11416)Jon Rood2-0/+3
* Fix py-yt for Python 2 by requesting older py-ipython version. * Add conflicts statement to py-ipython because version 7: is not compatible with python@2.7
2019-05-15New Package: NTPoly (#11412)william-dawson1-0/+29
2019-05-14Remove vestigial print statement in module logic (#11438)Greg Becker1-1/+0
Remove a vestigial print statement introduced in #8570
2019-05-14Add new versions of metaphysicl and change masa to use branch instead of ↵Jon Rood2-2/+4
tag. (#11436)
2019-05-14r-bh: add 1.69.0-1 (#11435)Justin S1-0/+2
2019-05-14rename py-pauvr to py-pauvre (#11437)Levi Baber1-2/+2
* rename py-pauvr to py-pauvre
2019-05-14m4 package: fix OS version check (#11290)George Zagaris1-1/+1
f242f5f removed spec.architecture.platform_os, which was used to test an option in the 'm4' package. The attribute is now accessed as 'spec.architecture.os'.
2019-05-13Add master branch of leveldb (#11405)Adam J. Stewart1-0/+2
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