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2023-05-31CachedCMakePackage: add CUDA/HIP options and improve independent builds (#37592)Brian Van Essen2-186/+212
* Add CMake options for building with CUDA/HIP support to CachedCMakePackages (intended to reduce duplication across packages building with +hip/+cuda and using CachedCMakePackage) * Define generic variables like CMAKE_PREFIX_PATH for CachedCMakePackages (so that a user may invoke "cmake" themselves without needing to setthem on the command line). * Make `lbann` a CachedCMakePackage. Co-authored-by: Chris White <white238@llnl.gov>
2023-05-31libtheora: enforce math library (libm.so) linkage (#37891)QuellynSnead1-0/+1
2023-05-31julia: add patch to fix printing of `BigFloat` with MPFR v4.2 (#37992)Mosè Giordano1-0/+9
2023-05-31gcc: add 11.4.0 (#37988)Michael Kuhn1-0/+1
2023-05-30py-pandas: add v2.0.2 (#38005)Adam J. Stewart1-0/+1
2023-05-30Bugfix: cray manifest parsing regression (#37909)Tiziano Müller4-5/+19
fa7719a changed syntax for specifying exact versions, which are required for some compiler specs (including those read as part of parsing a Cray manifest). This fixes that and also makes a couple other improvements to manifest parsing. * Instantiate compiler specs with exact versions (fixes #37893) * fix slingshot network detection (CPE 22.10+ has libcxi.so in /usr/lib64) * "spack external find": add arg to ignore default dir for cray manifests
2023-05-30HPL: amdalloc with AOCC 4.0 (#37757)AMD Toolchain Support1-0/+8
* adding amdalloc when using aocc 4 * adding and libm for aocc3.2
2023-05-30cp2k fixes for aocc (#37758)AMD Toolchain Support2-2/+15
2023-05-30Simplify implementation of "get_compiler_config" (#37989)Massimiliano Culpo1-28/+18
2023-05-30intel-mpi-benchmarks: Add MPI implementation check variant (#37363)Jack Morrison1-1/+7
* Add MPI implementation check variant to Intel MPI Benchmarks * [@spackbot] updating style on behalf of jack-morrison
2023-05-30Update SST packages to 13.0.0 (#37467)Eric Berquist4-13/+83
* add sst-{core,elements,macro} v13.0.0 * Add newest DUMPI versions and remove unavailable ones * update maintainer lists * sst-core: tracking and profiling flags * sst-elements with Pin requires the Pin location * sst-core: Zoltan integration was removed in version 12 * spack style fixes * sst-core: ensure Python is in the sst{sim,info}.x rpaths * sst-macro: update homepage and maintainers * spack style --fix
2023-05-30julia: fix build for @1.8.4:1.8.5 (#37990)Michael Kuhn1-0/+7
julia@1.8.4:1.8.5 fails to build because it does not find libstdc++ (see https://github.com/JuliaLang/julia/issues/47987).
2023-05-30ucx: add 1.14.1 (#37991)Carlos Bederián1-1/+2
2023-05-30podio: Add 0.16.5 tag (#37994)Thomas Madlener1-0/+1
2023-05-30gobject-introspection: add 1.76.1 (#37995)Michael Kuhn1-0/+1
2023-05-30py-dunamai: add 1.17.0 (#38003)Manuela Kuhn1-0/+1
2023-05-30py-duecredit: add 0.9.2 (#38002)Manuela Kuhn1-1/+2
2023-05-30py-datalad-container: add 1.2.0 (#38000)Manuela Kuhn1-3/+6
2023-05-30py-datalad-metalad: add 0-4-17 and new dep py-datalad-deprecated (#37993)Manuela Kuhn2-2/+33
* py-datalad-metalad: add 0-4-17 and new dep py-datalad-deprecated * Fix style
2023-05-30py-cryptography: add 40.0.2 (#37925)Manuela Kuhn1-5/+2
* py-cryptography: add 40.0.2 * Add pkgconfig dependency
2023-05-29tests/hdf5: convert to new stand-alone test process (#35732)Tamara Dahlgren1-102/+74
2023-05-29sqlite: convert to new stand-alone test process (#37722)Tamara Dahlgren1-38/+13
2023-05-29Remove patchelf self-relocation (#33834)Harmen Stoppels2-43/+1
2023-05-29tests/biobambam2: convert to new stand-alone test process (#35696)Tamara Dahlgren1-15/+6
2023-05-29sentieon-genomics: replacing square brackets in help (#37622)snehring1-1/+1
2023-05-29amgx: add v2.2.0 and v2.3.0 (#37567)Chris White1-0/+2
2023-05-29nwchem: fix non-fftw fftw-api providers (#37442)Carlos Bederián1-1/+1
2023-05-29glib: add 2.76.3 and 2.76.2, update build systems (#37226)Michael Kuhn1-106/+97
This also converts the package to the new way of handling multiple build systems. Co-authored-by: michaelkuhn <michaelkuhn@users.noreply.github.com>
2023-05-29Automated deployment to update package flux-core 2023-05-15 (#37684)Vanessasaurus0-0/+0
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
2023-05-29build(deps): bump codecov/codecov-action from 3.1.3 to 3.1.4 (#37688)dependabot[bot]3-7/+7
Bumps [codecov/codecov-action](https://github.com/codecov/codecov-action) from 3.1.3 to 3.1.4. - [Release notes](https://github.com/codecov/codecov-action/releases) - [Changelog](https://github.com/codecov/codecov-action/blob/main/CHANGELOG.md) - [Commits](https://github.com/codecov/codecov-action/compare/894ff025c7b54547a9a2a1e9f228beae737ad3c2...eaaf4bedf32dbdc6b720b63067d99c4d77d6047d) --- updated-dependencies: - dependency-name: codecov/codecov-action dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-05-29add flux-security variant to flux-core (#37689)Vanessasaurus1-0/+9
This will build flux-security separately to have a flux-imp that can be defined in a flux broker.toml. Note that the user that wants a multi-user setup is recommended to create a view, and then a system/broker.toml in flux config directory that points to it. Signed-off-by: vsoch <vsoch@users.noreply.github.com> Co-authored-by: vsoch <vsoch@users.noreply.github.com>
2023-05-29highfive: add newer versions + add git repo (#37635)Alberto Invernizzi1-0/+4
* add versions * add develop pointing to git@master
2023-05-29binutils: convert to new stand-alone test process (#37690)Tamara Dahlgren1-25/+31
2023-05-29libsigsegv: convert to new stand-alone test process (#37691)Tamara Dahlgren1-33/+12
2023-05-29spectre: add v2023.05.16 (#37716)SXS Bot1-0/+3
Co-authored-by: sxs-bot <sxs-bot@users.noreply.github.com>
2023-05-29m4: convert to new stand-alone test process (#37723)Tamara Dahlgren1-11/+12
2023-05-29armpl-gcc: add version 23.04.1 (#37907)Annop Wongwathanarat1-0/+51
2023-05-29Use @= in some packages (#37737)Harmen Stoppels8-18/+12
Change the pattern @x.y:x.y.0 -> @=x.y Co-authored-by: haampie <haampie@users.noreply.github.com>
2023-05-29hdfview: add 3.1.4, 3.2.0, 3.3.0. Update dependencies. (#37745)Lehman Garrison1-8/+17
2023-05-29tests/arborx: convert to new stand-alone test process (#37778)Tamara Dahlgren1-25/+16
Co-authored-by: Andrey Prokopenko <andrey.prok@gmail.com>
2023-05-29hbase: add v2.5.3 (#37518)Alec Scott1-0/+1
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2023-05-29survey: add v1.0.8 (#37385)Jim Galarowicz1-1/+3
2023-05-29catch2: new versions (#37742)Nicolas Cornu1-1/+9
2023-05-29fix InternalConcretizerError msg (#37791)Harmen Stoppels1-6/+7
2023-05-29OPENMPI: disable use of sphinx (#37717)Howard Pritchard1-1/+1
Sphinx is used to build Open MPI manpages, etc. as part of the make dist process to create release tarballs. There should be no need/use to do this within Spack. Also some sites have older Sphinx installs which aren't compatible with the needs of the Open MPI documentation. For example, attempts to install openmpi@main fail at NERSC owing to such a situation. Since Spack normally is used to build from release tarballs, in which the docs have already been installed, this should present no issues. This configuration option will be ignored for older than 5.0.0 Open MPI releases. Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2023-05-29Add package for KUMI tuple library (#37795)Joel Falcou1-0/+21
2023-05-29bbcp: fix cloning "master" version (#37802)Brian Vanderwende1-1/+4
2023-05-29NAMD: add AVXTILES support (#37040)AMD Toolchain Support1-0/+14
2023-05-29berkeley-db: convert to new stand-alone test process (#35702)Tamara Dahlgren1-22/+38
2023-05-29dealii - add platform-introspection variant (#37833)Howard Pritchard1-0/+7
This option is needed for DFT FE - or more accurately the check needs to be checked off for a number of platforms or else the code doesn't work. Signed-off-by: Howard Pritchard <howardp@lanl.gov>
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