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2019-11-25Fix ROOT dependencies (for +r variant) (#13839)iarspider1-2/+2
2019-11-25Mapnik: fix runtime error involving py-pycairo and PDF (#13865)Sinan2-5/+7
* fix runtime error involving py-pycairo and PDF * Update var/spack/repos/builtin/packages/py-python-mapnik/package.py Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * fix env setup
2019-11-25Add the py-importlib-resources package (#13854)Joe Koning1-0/+22
* Add the py-importlib_re package * Rename package to conform with spack naming convention. * Rename package to py-importlib-resources Add python depend modules for previous python versions and depends_on python. * Add whitespaces.
2019-11-25cctools: fix python related error. (#13802)Toyohisa Kameyama3-3/+144
* cctools: fix python related error. * patch bugfix.
2019-11-25Add latest version of bazel (#13813)Sinan23-751/+315
* use bazel commit in #13112, and add version 0.24.1, and corresponding cc_env patch * undo preferred java version by dodo47 * patch for v0.26 * Update install steps * Add patches for more versions * Add unit tests * Update patches for new Spack env vars * env is already defined, use spackEnv
2019-11-25py-celery: added new package (#13851)Joe Koning1-0/+57
2019-11-25py-amqp: added new package (#13848)Joe Koning1-0/+22
* Add the py-amqp package * Add the py-vine dependency. * Add vine version and python dependency.
2019-11-25py-qtpy: enable use with pyqt5, pyside and pyside2 (#13837)iarspider1-2/+12
2019-11-25py-kombu: added new package (#13855)Joe Koning1-0/+23
2019-11-25prank: use Spack compilers and remove x86_64 opts from Makefile (#13877)t-karatsu1-0/+9
2019-11-25netperf: added new package (#13876)darmac1-0/+19
2019-11-25ltp: added new package (#13878)darmac1-0/+25
2019-11-25ACTS v0.11.0 + adding maintainer (#13880)Hadrien G1-0/+2
2019-11-25add new package : py-cssselect (#13879)darmac1-0/+21
2019-11-24ack: Fix install modifying download cache (#13836)Oliver Breitwieser1-5/+7
This makes several installs from the same download cache impossible once the hash of the used perl-install changes. Fixes: #13824 Change-Id: I5f10d9d54ae999d0ca7e4171f989dfca2e6a7169
2019-11-24tinker: initial commit (#13869)Christoph Junghans2-0/+137
2019-11-23ncurses: don't run strip internally (#13843)Christoph Junghans1-2/+3
* ncurses: don't run strip internally * setup_environment -> setup_build_environment * fix ABI change
2019-11-23py-matplotlib backend dependencies needed at runtime (#13867)Adam J. Stewart1-20/+20
2019-11-23Add py-scipy 1.3.3 (#13866)Adam J. Stewart1-1/+2
2019-11-23Add the py-humanfriendly package (#13853)Joe Koning1-0/+16
2019-11-23Fix setuptools dependency in py-snowballstemmer (#13844)Adam J. Stewart1-1/+1
2019-11-23Add the py-billiard package (#13849)Joe Koning1-0/+19
2019-11-23Add the py-parse package (#13856)Joe Koning1-0/+18
2019-11-23Add the py-vine package (#13857)Joe Koning1-0/+18
2019-11-23likwid: added version 5.0.0 (#13858)Sajid Ali1-1/+3
2019-11-23py-cached-property: added new package at v 1.5.1 (#13850)Joe Koning1-0/+17
2019-11-23ethtool: new package at version 4.8 (#13864)darmac1-0/+24
2019-11-22petsc: add version 3.12.2 (#13859)Satish Balay1-0/+1
2019-11-22New package: py-wub, with supporting fixes (#13773)George Hartzell4-9/+79
* Add py-wub, with supporting fixes - add py-wub - add py-pycmd because py-wub needs it - update py-statsmodels, which needs at least v0.9.0 to work with python3.7 because cython. * Update based on Adam's comments * Fix dependency types for py-six in py-wub * statsmodels tests fail, update comment w/ Issue # The statsmodels tests weren't run in the previous version of the package. If I enable them, the fail. Update the package comment with the statsmodels issue I opened to track the problem: https://github.com/statsmodels/statsmodels/issues/6263 * Update dependency types in py-wub/package.py * flake8 cleanups * Make statsmodels tests work - need to use patsy@0.5.1: - need to run the tests from within the build/lib* dir
2019-11-22cmd/install: remove unused install_status option (#13751)Greg Becker2-7/+8
* cmd/install: remove unused install_status option * update bash completions for spack install
2019-11-22Remove mirrors from Travis cache (#13841)Massimiliano Culpo1-1/+0
2019-11-21votca-*: add v1.5.1 (#13822)Christoph Junghans4-3/+7
2019-11-21Fixed detection for cascadelake microarchitecture (#13820)Massimiliano Culpo3-1/+23
fixes #13803
2019-11-21Add mg, a gnu-emacs like fork of microemacs (#13812)George Hartzell1-0/+37
* Add mg, a gnu-emacs like fork of microemacs * Use Package, since not really an Autotools package Switch from AutotoolsPackage to Package. Even though mg has a configure script, it's not really an Autotools package. * Need to also provide --prefix to configure
2019-11-21cbtf-krell: add rpcsvc-proto and libtirpc dependency. (#13800)Toyohisa Kameyama1-0/+6
2019-11-21doxygen: added missing dependencies to the package (#10589)Elizabeth Fischer1-0/+2
See http://www.doxygen.nl/manual/install.html
2019-11-20texinfo: fix unescaped braces, and update locale handling (#13815)t-karatsu5-0/+86
* texinfo: Fix unescaped braces for older version. * texinfo: update locale handling.
2019-11-20update Argobots and BOLT (#13765)Shintaro Iwasaki2-1/+5
* argobots: update to 1.0rc2 * bolt: update to 1.0rc3 * argobots/bolt: add maintainers * argobots: use "master" for the master branch
2019-11-20added hmmer v 3.3 (#13793)Douglas Duckworth1-1/+2
2019-11-20Updated versions numbers for Aluminum and Hydrogen. (#13814)Brian Van Essen2-0/+5
2019-11-20mirror bug fixes: symlinks, duplicate patch names, and exception handling ↵Paul Ferrell4-17/+24
(#13789) * Some packages (e.g. mpfr at the time of this patch) can have patches with the same name but different contents (which apply to different versions of the package). This appends part of the patch hash to the cache file name to avoid conflicts. * Some exceptions which occur during fetching are not a subclass of SpackError and therefore do not have a 'message' attribute. This updates the logic for mirroring a single spec (add_single_spec) to produce an appropriate error message in that case (where before it failed with an AttributeError) * In various circumstances, a mirror can contain the universal storage path but not a cosmetic symlink; in this case it would not generate a symlink. Now "spack mirror create" will create a symlink for any package that doesn't have one.
2019-11-20ampliconnoise: Change return type of function. (#13766)t-karatsu2-7/+72
* ampliconnoise: Change function type. * ampliconnoise: updated api call to setup run environment
2019-11-20find-circ: a new package. (#13767)健美猞猁1-0/+34
* find-circ: a new package. * flake8.
2019-11-20miranda: a new package. (#13768)健美猞猁1-0/+16
2019-11-20tensorflow-serving-client: add new package (#13771)Figroc Chen1-0/+19
2019-11-20bpp-suite: Clarify 'isinf' function's namespace. (#13777)t-karatsu2-0/+94
2019-11-20Fix for overlong shebang in valgrind (#13779)David Hows1-0/+8
Fix for some overlong shebangs in valgrind. Borrowed from verrou/package.py
2019-11-20py-numexpr3: fix version (#13781)noguchi-k1-1/+1
2019-11-20mpich: Add 3.3.2 (#13790)Ken Raffenetti1-0/+1
2019-11-20genrich: new package at 0.6 (#13791)Justin S1-0/+19
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