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2016-01-26Fixes issues introduced after merge with conflictsalalazo2-2/+2
2016-01-26Fixes issues introduced after merge with conflictsalalazo2-21/+25
2016-01-26Merge branch 'develop' of https://github.com/LLNL/spack into ↵alalazo530-2030/+23856
refactoring/resource_directive Conflicts: lib/spack/spack/fetch_strategy.py lib/spack/spack/mirror.py lib/spack/spack/package.py
2016-01-25Merge pull request #396 from adamjstewart/features/hdf5Todd Gamblin1-0/+5
Add szip variant
2016-01-25Add szip variantAdam J. Stewart1-0/+5
2016-01-25Merge pull request #395 from adamjstewart/features/orphanTodd Gamblin1-4/+4
Fix variable name bug
2016-01-25Fix variable name bugAdam J. Stewart1-4/+4
2016-01-25Merge pull request #394 from LLNL/bugfix/apple-llvm-compiler-detectionTodd Gamblin1-3/+29
Bugfix/apple llvm compiler detection
2016-01-25Fixes #259: Apple clang compiler detectionTodd Gamblin1-3/+29
- Clang compilers are now versioned with the raw LLVM version or, on macs, with Apple's version with a suffix.
2016-01-25Fix regex to find version on OS XAdam J. Stewart1-1/+1
2016-01-25Fixes #74: minor fixes to spack mirror.Todd Gamblin2-2/+9
2016-01-25Merge pull request #393 from LLNL/bugfix/mirror-glitches-gh382Todd Gamblin10-71/+80
Bugfix/mirror glitches gh382
2016-01-25More thorough mirror test: test full round-tripTodd Gamblin4-37/+37
- Old test: did not attempt to actually fetch mirrored packages. - New test: 1. Creates a temporary mirror, 2. Registers it with spack, 3. Fetches from it, and 4. Verifies that the fetched archive matches the original - This test will hopefully mean that `spack mirror` is less brittle from now on.
2016-01-25Refactor mock_repo: add a destroy() method.Todd Gamblin6-28/+20
- classes using mock_repo need not know about its stage now.
2016-01-24Fixes #382: Issues with spack fetch.Todd Gamblin1-1/+7
- urljoin() was compliant with RFC 1808 but not with my understanding of how paths should be joined. - updated path joining logic to comply.
2016-01-24Minor line width reductions.Todd Gamblin1-3/+6
2016-01-24Better errors for mkdirp failure in mirror.Todd Gamblin1-2/+10
2016-01-24Minor cleanup. 80 char width for command description.Todd Gamblin1-20/+20
2016-01-22Merge pull request #390 from adamjstewart/features/nagTodd Gamblin1-1/+1
Fix link_paths to point to c++
2016-01-22Merge pull request #336 from scheibelp/features/boost-additive-libsTodd Gamblin1-26/+85
additive compilation of boost libraries
2016-01-22Merge pull request #392 from alfredo-gimenez/developTodd Gamblin2-0/+37
Patch fix for boost@1.60.0%gcc@4.4.7
2016-01-22Slightly more robust approach for setting defaults for noinstall_libsPeter Scheibel1-1/+1
2016-01-221. added default install libs (atomic, test, locale, program_options)Peter Scheibel1-6/+13
2. clarify comment for default_noinstall_libs 3. renamed regex_icu variant to icu_support (both the locale and regex libs can use it) 4. explicitly set b2 install ICU_PATH when regex_icu is activated
2016-01-22Patch fix for boost@1.60.0%gcc@4.4.7Alfredo Gimenez2-0/+37
2016-01-22Fixed referencePeter Scheibel1-1/+1
2016-01-21Sticking with additive approach but now most libraries are installed by default.Peter Scheibel1-9/+17
2016-01-21Merge pull request #389 from eschnett/eschnett/openmpi-updateTodd Gamblin1-1/+2
Update OpenMPI to 1.10.2
2016-01-21Remove cxx symlink, tell NAG to look for c++ symlinkAdam J. Stewart2-2/+1
2016-01-21Add symlink cxx to point to ccAdam J. Stewart1-0/+1
2016-01-21Disable patch that was merged into upstream in 1.10.2Erik Schnetter1-1/+1
2016-01-21Update OpenMPI to 1.10.2Erik Schnetter1-0/+1
2016-01-21Merge pull request #383 from LLNL/features/better-executable-argsTodd Gamblin11-60/+116
Refactor args for Executable.__call__
2016-01-21Refactor args for Executable.__call__Todd Gamblin11-60/+116
- simplify output, error, and input redirection - `return_output=True` is now `output=str` - `return_output=True` will still work for the time being but is deprecated. - previously you could say `return_output=True` and `output=<stream>`, which wouldn't actually write to the stream. Now you actually can't specify erroneous cases since there is only one parameter with mutually exclusive options..
2016-01-21Merge pull request #384 from epfl-scitas/packages/elpaTodd Gamblin1-0/+55
added package : elpa
2016-01-21Merge pull request #386 from adamjstewart/features/mpfrTodd Gamblin1-1/+1
Remove constraint on dependency version
2016-01-21Remove constraint on dependency versionAdam J. Stewart1-1/+1
2016-01-21Merge branch 'develop' of https://github.com/LLNL/spack into packages/elpaalalazo1-10/+24
2016-01-21Merge pull request #376 from adamjstewart/features/mvapich2Todd Gamblin1-10/+24
Various updates to MVAPICH2 package
2016-01-21Merge pull request #380 from epfl-scitas/packages/mumpsTodd Gamblin3-0/+227
Adding packages MUMPS and ScaLAPACK
2016-01-21elpa : added missing dependenciesalalazo1-1/+10
2016-01-21Merge remote-tracking branch 'scitas/packages/mumps' into packages/elpaalalazo3-0/+227
2016-01-21Merge branch 'develop' into packages/elpaalalazo8-34/+119
2016-01-20Merge pull request #350 from adamjstewart/features/nagTodd Gamblin5-4/+39
Add NAG Fortran Compiler support
2016-01-20Merge pull request #381 from adamjstewart/features/locationTodd Gamblin1-1/+1
Fixed typo when running spack help
2016-01-20Fixed typo when running spack helpAdam J. Stewart1-1/+1
2016-01-20Redirect STDERR to STDOUT for compiler versionAdam J. Stewart1-1/+2
This is necessary for the NAG Fortran compiler, which prints its version message to STDERR instead of STDOUT. This message was previously being ignored, preventing spack from finding the compiler's version or automatically adding it to the compilers.yaml configuration file.
2016-01-20Merge pull request #379 from epfl-scitas/packages/hdf5Todd Gamblin2-29/+79
HDF5 + OpenMPI : modified existing packages
2016-01-20Minor correction to install mumps+mpiNicolas Richart3-15/+37
2016-01-20openmpi : turned torque support into a variant (default false)alalazo2-29/+79
hdf5 : fixed a few bugs, removed suspicious macro deinition, etc.
2016-01-20renaming packages to follow changes on developNicolas Richart3-0/+0
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