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* make py-setuptools a run-time-only dep for py-basemap and patch python package to only apply setuptools flag for build deps
* py-qtconsole does not require setuptools
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* pushing partially done recipe for snphylo
* r-snphylo: try
* phylip: added version 3.697
* snphylo: updated package.py
* snphylo: flake8 error fixed
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* This allows Spack to work with MD5 hashes on machines with openssl in FIPS mode.
* We are still using MD5 for validation in many places, and a later PR will replace all uses of MD5 with SHA256.
* This is a quick fix until that happens.
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* intel-xed: new package
The Intel X86 Encoder Decoder library for encoding and decoding
x86 machine instructions.
* intel-xed: style fixes for flake8.
* intel-xed: better style fix
* intel-xed: update to version 2018.02.14, add PYTHONPATH for
building with python 3, cleanup the opt flag.
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The restrict compilation option with icc causes deadlock when multithreading is used. This issue has already been reported to the Scotch development team, but for current versions it is more reliable not to use the restrict compilation option.
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* libtool: actually do symlinking correctly on darwin
Version 4 of the libtool/darwin debacle:
AutotoolsPackage hardcodes libtool & libtoolize into the autoreconf
stage, so the commands `libtool` and `libtoolize` MUST be present, and
shimming in glibtoolize into AutotoolsPackage when sys.platfrom ==
'darwin' does not work.
join_path(spec['libtool'].prefix.bin, 'libtool') still shadows system
BSD libtool (in apple-cctools, see PR #7177), but this shadowing could
be okay, depending on the combination of dependent specs.
* librom: new package
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* py-backports-functools-lru-cache: add version 1.5
* py-backports-functools-lru-cache: fix conflicts
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* Adding unzip package.
* Removing bzip2 dependency in unzip and raising an error when on Cray.
* Fixing error.
* Using conflicts statement for Cray detection in unzip package.
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* xorg-server: Add several dependencies.
* libepoxy: Add dependendies mesa and meson.
* mesa: Add dependencies for hwrender.
* mesa: undo some changes.
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handled in cray platform) (#7406)
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* VMD-python v2.0.10 - new package
* removing extraneous comments
* flake8 error - trailing blank lines removed
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* add headers property to netlib-lapack and intel-mkl
* ghost: fix finding cblas header and libs (at least for mkl and netlib-lapack, which provide headers())
* fix flake8 errors
* ghost: remove unnecessary query parameter
* fix flake8 errors
* ghost: make it a CudaPackage (as suggested by @davydden, thanks!)
* ghost: missing whitespace
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This hash includes the content of the package itself as well as the DAG
for the package.
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This calculates a hash which depends on the complete content of the
package including sources and the associated `package.py` file.
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This helps to ensure that patches are applied consistently and will also
be used as the source for the patch part of full package hashes.
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This will be included in the full hash of packages.
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These attributes are ignored when doing a content hash of a package.
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This will be included in the full hash of packages.
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It seems there has been a change in concretization that resulted in
a request for a llvm latest (5.0.1) while not satisfying the later
more precise request for a version.
Remove the first line and only rely on the last.
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A build of python@3.X had the following in the logs:
```
The necessary bits to build these optional modules were not found:
_dbm _gdbm _tkinter
```
As Tkinter is already a variant, we adopt the same strategy for dbm.
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#Fix imports
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fixes #6965
closes #6968
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Some code got moved around so the patches needed to be updated
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fixes #7505
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This includes:
* Added latest available versions (1.11.9, 2.0.0)
* Added variants to enable graphical output from lstopo
* Enabled build of the bundled netloc package if @2.0.0:
* Added dependency from numactl if @:1.11.9
* Added a constraint to avoid using hwloc@2.0.0 with openmpi
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cube's configure only recognizes qt versions with single digit version
components and breaks with qt 5.10. Patch the configure files directly
to avoid having to regenerate them.
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